| Occurrences: |
view occurrences
| id |
7008ea4b-9d58-4378-b509-7fef120918af
|
| scientificName |
Ophiactis savignyi
|
| AphiaID |
125122
|
| eventDate |
2022-05-25
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
S152
|
| target_gene |
COI
|
| DNA_sequence |
TTTATCTGGCCCAACCGCCCACGCAGGAGGGTGTGTAGACCTCGCGATCTTTTCTCTACACCTGGCCGGAGCCTCATCTATTATGGCCTCTATAAACTTTATAACCACTATTCTTAACATGCGGGCCCCCGGAATGACCATGGACCGTATGCCACTTTTCGTTTGATCTATTTTATTAACGACAATCCTCCTCTTACTCTCCTTACCTGTTCTAGCCGGAGCCATCACTATGCTCCTCACAGACCGAAAAATTAACACTACCTTCTTCGACCCAACAGGGGGAGGAGACCCTATTTTATTTCAACACTTGTTC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "KY263280",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "GU480578",
"identity": 0.99,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "MZ560288",
"identity": 0.99,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "MN690259",
"identity": 0.987,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "KM234230",
"identity": 0.971,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
13.0
|
| id |
79d0bb7d-8967-4a78-90a1-2890898934c1
|
| scientificName |
Ophiactis savignyi
|
| AphiaID |
125122
|
| eventDate |
2022-05-25
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S153
|
| target_gene |
COI
|
| DNA_sequence |
TTATCTGGCCCAACCGCCCACGCAGGGGGATGTGTAGACCTCGCAATCTTTTCTCTACACCTGGCCGGGGCCTCATCTATTATGGCCTCTATAAACTTTATAACCACTATTCTTAACATGCGGGCCCCCGGAATGACCATGGATCGTATGCCTCTTTTCGTTTGATCAATTTTATTAACGACAATCCTTCTCCTACTCTCCTTACCTGTTCTAGCCGGAGCCATCACTATGCTCCTCACAGACCGAAAAATTAACACTACCTTCTTCGACCCAACAGGGGGAGGAGACCCTATTTTATTTCAACACTTATTC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"confidence": 0.94
}
]
}
|
| organismQuantity |
325.0
|
| id |
1109e309-eb24-4459-b3d8-d421811c816a
|
| scientificName |
Ophiactis savignyi
|
| AphiaID |
125122
|
| eventDate |
2022-05-25
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
S152
|
| target_gene |
COI
|
| DNA_sequence |
TTATCTGGCCCAACCGCCCACGCAGGGGGATGTGTAGACCTCGCAATCTTTTCTCTACACCTGGCCGGGGCCTCATCTATTATGGCCTCTATAAACTTTATAACCACTATTCTTAACATGCGGGCCCCCGGAATGACCATGGATCGTATGCCTCTTTTCGTTTGATCAATTTTATTAACGACAATCCTTCTCCTACTCTCCTTACCTGTTCTAGCCGGAGCCATCACTATGCTCCTCACAGACCGAAAAATTAACACTACCTTCTTCGACCCAACAGGGGGAGGAGACCCTATTTTATTTCAACACTTATTC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"confidence": 0.94
}
]
}
|
| organismQuantity |
247.0
|
| id |
e0a0ad8c-ceff-4b0e-9ea5-2534bd0c3694
|
| scientificName |
Ophiactis savignyi
|
| AphiaID |
125122
|
| eventDate |
2022-05-25
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S135
|
| target_gene |
COI
|
| DNA_sequence |
TTATCTGGCCCAACCGCCCACGCAGGGGGATGTGTAGACCTCGCAATCTTTTCTCTACACCTGGCCGGGGCCTCATCTATTATGGCCTCTATAAACTTTATAACCACTATTCTTAACATGCGGGCCCCCGGAATGACCATGGATCGTATGCCTCTTTTCGTTTGATCAATTTTATTAACGACAATCCTTCTCCTACTCTCCTTACCTGTTCTAGCCGGAGCCATCACTATGCTCCTCACAGACCGAAAAATTAACACTACCTTCTTCGACCCAACAGGGGGAGGAGACCCTATTTTATTTCAACACTTATTC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"confidence": 0.94
}
]
}
|
| organismQuantity |
2.0
|
| id |
d0404ee3-9740-4140-b874-868a87394de5
|
| scientificName |
Ophiactis savignyi
|
| AphiaID |
125122
|
| eventDate |
2022-05-25
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S136
|
| target_gene |
COI
|
| DNA_sequence |
TTATCTGGCCCAACCGCCCACGCAGGGGGATGTGTAGACCTCGCAATCTTTTCTCTACACCTGGCCGGGGCCTCATCTATTATGGCCTCTATAAACTTTATAACCACTATTCTTAACATGCGGGCCCCCGGAATGACCATGGATCGTATGCCTCTTTTCGTTTGATCAATTTTATTAACGACAATCCTTCTCCTACTCTCCTTACCTGTTCTAGCCGGAGCCATCACTATGCTCCTCACAGACCGAAAAATTAACACTACCTTCTTCGACCCAACAGGGGGAGGAGACCCTATTTTATTTCAACACTTATTC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"confidence": 0.94
}
]
}
|
| organismQuantity |
1.0
|
|