PacMAN decision support system

Potential detection of Euterpina acutifrons in Fiji

Description:

Potential detection of Euterpina acutifrons with confidence low on 2024-02-28 in material sample USP-24-01-202, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Euterpina acutifrons
Arthropoda > Copepoda > Harpacticoida > Tachidiidae
WoRMS: 116162

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

Reads:

39.0

Names:

Occurrences:

view occurrences

id	7d10d6be-699c-42b0-b3e2-b12028c29fe7
scientificName	Euterpina acutifrons
AphiaID	116162
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-202
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAATGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTCAACACGTCGCGGGCGGTTCGTTATTCGACGTTACTGCCCCGTCGATGTGTGTGTTTTGACAGAGGCTTCGGGGTGATCTTAATCGATTGTCTCGTAGTGCTGTCAGGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCA
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Euterpina acutifrons", "scientificNameID": "urn:lsid:marinespecies.org:taxname:116162", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Euterpina acutifrons", "scientificNameID": "urn:lsid:marinespecies.org:taxname:116162", "accession": "AY446896.1.873_U", "identity": 0.976, "query_cover": 0.9952 } ] }
organismQuantity	39.0

id	499b6abe-8a7f-4a3e-8345-a230a2fb4aff
scientificName	Euterpina acutifrons
AphiaID	116162
eventDate	2024-02-28
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-93
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAATGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTCAACACGTCGCGGGCGGTTCGTTATTCGACGTTACTGCCCCGTCGATGTGTGTGTTTTGACAGAGGCTTCGGGGTGATCTTAATCGATTGTCTCGTAGTGCTGTCAGGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCA
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Euterpina acutifrons", "scientificNameID": "urn:lsid:marinespecies.org:taxname:116162", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Euterpina acutifrons", "scientificNameID": "urn:lsid:marinespecies.org:taxname:116162", "accession": "AY446896.1.873_U", "identity": 0.976, "query_cover": 0.9952 } ] }
organismQuantity	19.0

id	1155d7ff-6e63-455c-b213-9dacfd5315a5
scientificName	Euterpina acutifrons
AphiaID	116162
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-201
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAATGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTCAACACGTCGCGGGCGGTTCGTTATTCGACGTTACTGCCCCGTCGATGTGTGTGTTTTGACAGAGGCTTCGGGGTGATCTTAATCGATTGTCTCGTAGTGCTGTCAGGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCA
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Euterpina acutifrons", "scientificNameID": "urn:lsid:marinespecies.org:taxname:116162", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Euterpina acutifrons", "scientificNameID": "urn:lsid:marinespecies.org:taxname:116162", "accession": "AY446896.1.873_U", "identity": 0.976, "query_cover": 0.9952 } ] }
organismQuantity	4.0

id	bdd3e066-c75b-4544-8c13-08706fb87daf
scientificName	Euterpina acutifrons
AphiaID	116162
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-196
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAATGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTCAACACGTCGCGGGCGGTTCGTTATTCGACGTTACTGCCCCGTCGATGTGTGTGTTTTGACAGAGGCTTCGGGGTGATCTTAATCGATTGTCTCGTAGTGCTGTCAGGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCA
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Euterpina acutifrons", "scientificNameID": "urn:lsid:marinespecies.org:taxname:116162", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Euterpina acutifrons", "scientificNameID": "urn:lsid:marinespecies.org:taxname:116162", "accession": "AY446896.1.873_U", "identity": 0.976, "query_cover": 0.9952 } ] }
organismQuantity	4.0

id	a25b69c2-e75e-4104-9ede-bdd839a41cb9
scientificName	Euterpina acutifrons
AphiaID	116162
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-94
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAATGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTCAACACGTCGCGGGCGGTTCGTTATTCGACGTTACTGCCCCGTCGATGTGTGTGTTTTGACAGAGGCTTCGGGGTGATCTTAATCGATTGTCTCGTAGTGCTGTCAGGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCA
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Euterpina acutifrons", "scientificNameID": "urn:lsid:marinespecies.org:taxname:116162", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Euterpina acutifrons", "scientificNameID": "urn:lsid:marinespecies.org:taxname:116162", "accession": "AY446896.1.873_U", "identity": 0.976, "query_cover": 0.9952 } ] }
organismQuantity	3.0

Euterpina acutifrons does not have an offial status in Fiji.

No notes found.