Occurrences: |
view occurrences
id |
e854a820-4713-4b76-9ad6-6b352c5fae2b
|
scientificName |
Pennaria disticha
|
AphiaID |
117802
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-11
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGATGGGCCAGTTGGTCCGCCGCAAGGTGTGTTACCGACTGGTCTGTTCTTCTTCGCAAAGACTGCTCATGCACTTTATTGTGTGTGTGTAGGATTTACGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Pennaria disticha",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117802",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_disticha",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117802",
"accession": "GQ424342.1.1801_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_disticha",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117802",
"accession": "EU883545.1.1796_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_disticha",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117802",
"accession": "AY920762.1.1776_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_sp.",
"accession": "KF962290.1.1674_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_sp.",
"accession": "KF962291.1.1674_U",
"identity": 0.995,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
86.0
|
id |
8acae9d7-ca05-4a60-b9d7-55f3418d7a9a
|
scientificName |
Pennaria disticha
|
AphiaID |
117802
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-03
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGATGGGCCAGTTGGTCCGCCGAAAGGTGTGTTACCGACTGGTCTGTTCTTCTTCGCAAAGACTGCTCATGCACTTTATTGTGTGTGTGTAGGATTTACGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Pennaria disticha",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117802",
"confidence": 0.98
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_sp.",
"accession": "KF962290.1.1674_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_sp.",
"accession": "KF962291.1.1674_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_disticha",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117802",
"accession": "MH392743.1.634_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_disticha",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117802",
"accession": "GQ424342.1.1801_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_disticha",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117802",
"accession": "EU883545.1.1796_U",
"identity": 0.995,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
17.0
|
id |
8baa7500-77e2-4754-8985-dc8e86257041
|
scientificName |
Pennaria disticha
|
AphiaID |
117802
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-07
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGATGGGCCAGTTGGTCCGCCGAAAGGTGTGTTACCGACTGGTCTGTTCTTCTTCGCAAAGACTGCTCATGCACTTTATTGTGTGTGTGTAGGATTTACGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Pennaria disticha",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117802",
"confidence": 0.98
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_sp.",
"accession": "KF962290.1.1674_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_sp.",
"accession": "KF962291.1.1674_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_disticha",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117802",
"accession": "MH392743.1.634_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_disticha",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117802",
"accession": "GQ424342.1.1801_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_disticha",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117802",
"accession": "EU883545.1.1796_U",
"identity": 0.995,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
11.0
|
id |
1160a0e6-5738-4efa-ab00-cb6a22edf19f
|
scientificName |
Pennaria disticha
|
AphiaID |
117802
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-03
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGATGGGCCAGTTGGTCCGCCGCAAGGTGTGTTACCGACTGGTCTGTTCTTCTTCGCAAAGACTGCTCATGCACTTTATTGTGTGTGTGTAGGATTTACGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Pennaria disticha",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117802",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_disticha",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117802",
"accession": "GQ424342.1.1801_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_disticha",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117802",
"accession": "EU883545.1.1796_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_disticha",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117802",
"accession": "AY920762.1.1776_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_sp.",
"accession": "KF962290.1.1674_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_sp.",
"accession": "KF962291.1.1674_U",
"identity": 0.995,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
10.0
|
id |
4d7f3812-7ae6-421d-b9b2-2b77ce2c19de
|
scientificName |
Pennaria disticha
|
AphiaID |
117802
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-11
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGATGGGCCAGTTGGTCCGCCGAAAGGTGTGTTACCGACTGGTCTGTTCTTCTTCGCAAAGACTGCTCATGCACTTTATTGTGTGTGTGTAGGATTTACGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Pennaria disticha",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117802",
"confidence": 0.98
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_sp.",
"accession": "KF962290.1.1674_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_sp.",
"accession": "KF962291.1.1674_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_disticha",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117802",
"accession": "MH392743.1.634_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_disticha",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117802",
"accession": "GQ424342.1.1801_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_disticha",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117802",
"accession": "EU883545.1.1796_U",
"identity": 0.995,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
1.0
|
id |
b9ec276d-4185-4b48-ae95-5ff4eaaf76e1
|
scientificName |
Pennaria disticha
|
AphiaID |
117802
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-02
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGATGGGCCAGTTGGTCCGCCGCAAGGTGTGTTACCGACTGGTCTGTTCTTCTTCGCAAAGACTGCTCATGCACTTTATTGTGTGTGTGTAGGATTTACGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Pennaria disticha",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117802",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_disticha",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117802",
"accession": "GQ424342.1.1801_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_disticha",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117802",
"accession": "EU883545.1.1796_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_disticha",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117802",
"accession": "AY920762.1.1776_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_sp.",
"accession": "KF962290.1.1674_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pennaria_sp.",
"accession": "KF962291.1.1674_U",
"identity": 0.995,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
1.0
|
|