PacMAN decision support system

Potential detection of Apionsoma (Apionsoma) misakianum in Fiji

Description:

Potential detection of Apionsoma (Apionsoma) misakianum with confidence low on 2023-11-28 in material sample USP-24-01-68, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Apionsoma (Apionsoma) misakianum
Annelida > Sipuncula > Phascolosomatidae
WoRMS: 266492

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

Reads:

189.0

Names:

Occurrences:

view occurrences

id	444f2bd8-aa8c-4668-abf5-9db1f743fb60
scientificName	Apionsoma (Apionsoma) misakianum
AphiaID	266492
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-68
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGCTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGCGCCGGCGGGTGGTTCGCCTCGCGGCGTTTACTGCCTGCTCGGTCCTACCTATCCTGTTCACTGCGGTTGTGCTCTTGACTGAGTGCCCGCGGCGACTGGACCGTTTACTTTGAAAAAATTAGAGTGCTTAAGGCA
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apionsoma misakianum", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Apionsoma_misakianum", "accession": "DQ299952.1.1769_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Apionsoma_misakianum", "accession": "AY210440.1.1815_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	189.0

id	4a2351df-939c-41b2-a7c5-5a0644187295
scientificName	Apionsoma (Apionsoma) misakianum
AphiaID	266492
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-68
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCCCGAGGTAATGATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGGTGTTAGAGGTGAAATTCTTGGATCATCGCAAGACGAACAACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apionsoma misakianum", "confidence": 0.93 }, { "method": "VSEARCH", "scientificName": "Apionsoma_misakianum", "accession": "AY210440.1.1815_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Apionsoma_misakianum", "accession": "DQ299952.1.1769_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	182.0

id	f4386b34-3fc9-4dcb-8597-5ed6986aa372
scientificName	Apionsoma (Apionsoma) misakianum
AphiaID	266492
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-67
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCCCGAGGTAATGATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGGTGTTAGAGGTGAAATTCTTGGATCATCGCAAGACGAACAACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apionsoma misakianum", "confidence": 0.93 }, { "method": "VSEARCH", "scientificName": "Apionsoma_misakianum", "accession": "AY210440.1.1815_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Apionsoma_misakianum", "accession": "DQ299952.1.1769_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	67.0

id	4f67f4c6-69cb-4eb5-a6fe-a24545a01679
scientificName	Apionsoma (Apionsoma) misakianum
AphiaID	266492
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-67
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGCTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGCGCCGGCGGGTGGTTCGCCTCGCGGCGTTTACTGCCTGCTCGGTCCTACCTATCCTGTTCACTGCGGTTGTGCTCTTGACTGAGTGCCCGCGGCGACTGGACCGTTTACTTTGAAAAAATTAGAGTGCTTAAGGCA
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apionsoma misakianum", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Apionsoma_misakianum", "accession": "DQ299952.1.1769_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Apionsoma_misakianum", "accession": "AY210440.1.1815_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	60.0

id	b959778d-b61d-4928-942a-dbc48de1c696
scientificName	Apionsoma (Apionsoma) misakianum
AphiaID	266492
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-69
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCCCGAGGTAATGATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGGTGTTAGAGGTGAAATTCTTGGATCATCGCAAGACGAACAACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apionsoma misakianum", "confidence": 0.93 }, { "method": "VSEARCH", "scientificName": "Apionsoma_misakianum", "accession": "AY210440.1.1815_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Apionsoma_misakianum", "accession": "DQ299952.1.1769_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	58.0

id	66623d1e-613e-4212-bd55-a3dfa824f5fc
scientificName	Apionsoma (Apionsoma) misakianum
AphiaID	266492
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-69
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGCTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGCGCCGGCGGGTGGTTCGCCTCGCGGCGTTTACTGCCTGCTCGGTCCTACCTATCCTGTTCACTGCGGTTGTGCTCTTGACTGAGTGCCCGCGGCGACTGGACCGTTTACTTTGAAAAAATTAGAGTGCTTAAGGCA
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apionsoma misakianum", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Apionsoma_misakianum", "accession": "DQ299952.1.1769_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Apionsoma_misakianum", "accession": "AY210440.1.1815_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	51.0

id	77fe7a88-c966-4e9b-b606-378bdf4104f1
scientificName	Apionsoma (Apionsoma) misakianum
AphiaID	266492
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-76
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCCCGAGGTAATGATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGGTGTTAGAGGTGAAATTCTTGGATCATCGCAAGACGAACAACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apionsoma misakianum", "confidence": 0.93 }, { "method": "VSEARCH", "scientificName": "Apionsoma_misakianum", "accession": "AY210440.1.1815_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Apionsoma_misakianum", "accession": "DQ299952.1.1769_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	3.0

id	81cc1be2-6d04-41b9-9f58-2c3e26bb7a07
scientificName	Apionsoma (Apionsoma) misakianum
AphiaID	266492
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-74
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCCCGAGGTAATGATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGGTGTTAGAGGTGAAATTCTTGGATCATCGCAAGACGAACAACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apionsoma misakianum", "confidence": 0.93 }, { "method": "VSEARCH", "scientificName": "Apionsoma_misakianum", "accession": "AY210440.1.1815_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Apionsoma_misakianum", "accession": "DQ299952.1.1769_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	3.0

id	13855d1c-6311-4514-8521-6864d8fe09cc
scientificName	Apionsoma (Apionsoma) misakianum
AphiaID	266492
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-74
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGCTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGCGCCGGCGGGTGGTTCGCCTCGCGGCGTTTACTGCCTGCTCGGTCCTACCTATCCTGTTCACTGCGGTTGTGCTCTTGACTGAGTGCCCGCGGCGACTGGACCGTTTACTTTGAAAAAATTAGAGTGCTTAAGGCA
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apionsoma misakianum", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Apionsoma_misakianum", "accession": "DQ299952.1.1769_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Apionsoma_misakianum", "accession": "AY210440.1.1815_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	2.0

id	3e7354d4-53a2-4075-a8eb-df2bd7865950
scientificName	Apionsoma (Apionsoma) misakianum
AphiaID	266492
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-89
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCCCGAGGTAATGATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGGTGTTAGAGGTGAAATTCTTGGATCATCGCAAGACGAACAACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apionsoma misakianum", "confidence": 0.93 }, { "method": "VSEARCH", "scientificName": "Apionsoma_misakianum", "accession": "AY210440.1.1815_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Apionsoma_misakianum", "accession": "DQ299952.1.1769_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	1.0

id	6ca14f03-57aa-4c31-b109-30683a8896d5
scientificName	Apionsoma (Apionsoma) misakianum
AphiaID	266492
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-76
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGCTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGCGCCGGCGGGTGGTTCGCCTCGCGGCGTTTACTGCCTGCTCGGTCCTACCTATCCTGTTCACTGCGGTTGTGCTCTTGACTGAGTGCCCGCGGCGACTGGACCGTTTACTTTGAAAAAATTAGAGTGCTTAAGGCA
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apionsoma misakianum", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Apionsoma_misakianum", "accession": "DQ299952.1.1769_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Apionsoma_misakianum", "accession": "AY210440.1.1815_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	1.0

Apionsoma (Apionsoma) misakianum in Fiji

Status

Apionsoma (Apionsoma) misakianum has pest status in Fiji.

Notes

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No notes found.