PacMAN decision support system

Potential detection of Phallusia nigra in Fiji

Description:

Potential detection of Phallusia nigra with confidence medium on 2023-08-24 in material sample USP-24-01-64, marker 18S

Confidence:

medium

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Phallusia nigra
Chordata > Ascidiacea > Phlebobranchia > Ascidiidae
WoRMS: 103725

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

14.0

Names:

1

Occurrences:

view occurrences

id	30345a64-435d-453c-97bb-3e3338212737
scientificName	Phallusia nigra
AphiaID	103725
eventDate	2023-08-24
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-64
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Phallusia nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268455.1.1746_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268456.1.1746_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268457.1.1758_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268458.1.1766_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268459.1.1757_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	14.0

id	789b3695-e3ac-4a42-94d3-f89a87646b09
scientificName	Phallusia nigra
AphiaID	103725
eventDate	2023-08-24
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-34
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Phallusia nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268455.1.1746_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268456.1.1746_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268457.1.1758_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268458.1.1766_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268459.1.1757_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	8.0

id	a476347a-640f-4a2a-9fc9-b8a514001b9e
scientificName	Phallusia nigra
AphiaID	103725
eventDate	2023-08-24
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-65
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Phallusia nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268455.1.1746_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268456.1.1746_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268457.1.1758_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268458.1.1766_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268459.1.1757_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	7.0

id	13ec1a64-3923-4c9b-92af-2065e45490a2
scientificName	Phallusia nigra
AphiaID	103725
eventDate	2023-08-24
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-32
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Phallusia nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268455.1.1746_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268456.1.1746_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268457.1.1758_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268458.1.1766_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268459.1.1757_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	3.0

id	251668ff-f578-4245-8eb3-3988663e21a9
scientificName	Phallusia
eventDate	2023-08-24
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-65
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACGGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACTAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Phallusia", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103485", "confidence": 0.82 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "FM244845.1.1805_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ascidia_sydneiensis_samea", "accession": "AF165819.1.1065_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ascidia_ceratodes", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249976", "accession": "L12378.1.1821_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Corella_eumyota", "scientificNameID": "urn:lsid:marinespecies.org:taxname:173223", "accession": "FM244846.1.1733_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268455.1.1746_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	33.0

id	7dd332a4-0ed3-4228-9fcf-a4bd56dc961b
scientificName	Phallusia
eventDate	2023-08-24
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-64
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACGGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACTAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Phallusia", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103485", "confidence": 0.82 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "FM244845.1.1805_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ascidia_sydneiensis_samea", "accession": "AF165819.1.1065_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Ascidia_ceratodes", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249976", "accession": "L12378.1.1821_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Corella_eumyota", "scientificNameID": "urn:lsid:marinespecies.org:taxname:173223", "accession": "FM244846.1.1733_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Phallusia_nigra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103725", "accession": "KF268455.1.1746_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	13.0

Phallusia nigra in Fiji

Status

Phallusia nigra does not have an offial status in Fiji.

Notes

No notes found.