PacMAN decision support system

Potential detection of Halocynthia roretzi in Fiji

Description:

Potential detection of Halocynthia roretzi with confidence low on 2023-08-15 in material sample USP-24-01-56, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Halocynthia roretzi
Chordata > Ascidiacea > Stolidobranchia > Pyuridae
WoRMS: 250680

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

14951.0

Names:

7

Occurrences:

view occurrences

id	60d5aa30-9ba4-4a6f-95e4-d94b92680158
scientificName	Pyura
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-56
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	14951.0

id	2b80c300-324e-4098-9b30-4e312482cb27
scientificName	Pyura
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-58
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	12629.0

id	7af36b75-ced2-49e5-a326-69e3d1a6c0f1
scientificName	Pyura
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-59
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	6082.0

id	14e7925d-d502-4eab-b7cd-fb3bec74fc16
scientificName	Pyura
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-55
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	5586.0

id	44e4e82b-75f6-490a-9ec8-bab00a705b46
scientificName	Pyura
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-57
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	4282.0

id	8eefd46e-f382-4251-9fbd-1dfcbeb54bb7
scientificName	Pyura
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-54
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	2718.0

id	fc3eda47-e6f1-4f20-b105-ea3f05c5c087
scientificName	Pyura
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-38
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	40.0

id	9b50a412-9d11-4376-8ad8-b4a0afc7a6a8
scientificName	Pyura
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-37
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	38.0

id	649b13ea-e33e-4ab0-8388-1367dc6376f7
scientificName	Pyura
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-49
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	33.0

id	a40d9bed-7223-444a-aa26-1504809b998e
scientificName	Pyura
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-50
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	24.0

id	4a603a46-c67b-4ac5-8d97-d6d5e4374399
scientificName	Pyura
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-36
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	20.0

id	a29f77dd-84eb-4e7d-a8ae-e7085312b128
scientificName	Pyura
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-48
target_gene	18S
DNA_sequence	TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pyura", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103524", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Metandrocarpa_taylori", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250836", "accession": "AY903922.1.1772_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_roretzi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250680", "accession": "AB013016.1.1751_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Cnemidocarpa_finmarkiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103870", "accession": "L12413.1.1763_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Pyura_haustor", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251266", "accession": "AY903926.1.1774_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halocynthia_igaboja", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250677", "accession": "AY903925.1.1772_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	18.0

Halocynthia roretzi in Fiji

Status

Halocynthia roretzi does not have an offial status in Fiji.

Notes

No notes found.