Occurrences: |
view occurrences
id |
d133dcb3-e04a-4586-88b2-fe6eadca6dc5
|
scientificName |
Balanus trigonus
|
AphiaID |
106223
|
eventDate |
2023-05-31
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
eventID |
SUVA1_20230531_WC
|
materialSampleID |
USP-24-01-124
|
target_gene |
COI
|
DNA_sequence |
TCTCTCTAGAAATATTGCTCATTCAGGAGCTTCCGTAGATTTATCGATTTTTTCTTTACACTTAGCGGGAGCTTCATCAATTTTAGGAGCTATTAATTTTATATCAACTGTTATTAATATGCGAGCTGAAACATTAACATTTGATCGTCTTCCATTATTTGTGTGAAGAGTATTTATTACTGTAATTCTTCTATTACTTTCACTACCAGTATTAGCTGGAGCAATTACAATGTTATTAACTGACCGAAACCTAAATACTTCATTTTTTGACCCAACTGGAGGAGGTGACCCTATCTTATACCAACATTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "JQ035523",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308152",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308322",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MW277822",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "KC138452",
"identity": 0.997,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
4.0
|
id |
2a0919bd-9957-42de-832f-44c0e8549a85
|
scientificName |
Balanus trigonus
|
AphiaID |
106223
|
eventDate |
2023-05-31
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
eventID |
SUVA1_20230531_WA
|
materialSampleID |
USP-24-01-122
|
target_gene |
COI
|
DNA_sequence |
TCTCTCTAGAAATATTGCTCATTCAGGAGCTTCCGTAGATTTATCGATTTTTTCTTTACACTTAGCGGGAGCTTCATCAATTTTAGGAGCTATTAATTTTATATCAACTGTTATTAATATGCGAGCTGAAACATTAACATTTGATCGTCTTCCATTATTTGTGTGAAGAGTATTTATTACTGTAATTCTTCTATTACTTTCACTACCAGTATTAGCTGGAGCAATTACAATGTTATTAACTGACCGAAACCTAAATACTTCATTTTTTGACCCAACTGGAGGAGGTGACCCTATCTTATACCAACATTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "JQ035523",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308152",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308322",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MW277822",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "KC138452",
"identity": 0.997,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
1.0
|
id |
14ee20d3-301b-4734-9a98-aa8327ad5a81
|
scientificName |
Balanus trigonus
|
AphiaID |
106223
|
eventDate |
2023-05-31
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
eventID |
SUVA1_20230531_WB
|
materialSampleID |
USP-24-01-123
|
target_gene |
COI
|
DNA_sequence |
TCTCTCTAGAAATATTGCTCACTCAGGAGCTTCCGTAGATTTATCGATTTTTTCTTTACACTTAGCGGGAGCTTCATCAATTTTAGGAGCTATTAATTTTATATCAACTGTTATTAATATGCGAGCTGAAACATTAACATTTGATCGTCTTCCATTATTTGTGTGAAGAGTATTTATTACTGTAATTCTTCTATTACTTTCACTACCAGTATTAGCTGGAGCAATTACAATGTTATTAACTGACCGAAACCTAAATACTTCATTTTTTGACCCAACTGGAGGAGGTGACCCTATCTTATACCAACATTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "JQ035523",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308152",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308322",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MW277822",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "KC138452",
"identity": 0.994,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
75.0
|
id |
b07c707e-d148-4ef7-941f-dfa91778f206
|
scientificName |
Balanus trigonus
|
AphiaID |
106223
|
eventDate |
2023-05-31
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
eventID |
SUVA1_20230531_WA
|
materialSampleID |
USP-24-01-122
|
target_gene |
COI
|
DNA_sequence |
TCTCTCTAGAAATATTGCTCATTCAGGAGCTTCCGTAGATTTATCGATTTTTTCTTTACACTTAGCAGGAGCTTCATCAATTTTAGGAGCTATTAATTTTATATCAACTGTTATTAATATGCGAGCTGAAACATTAACATTTGATCGTCTTCCATTATTTGTGTGAAGAGTATTTATTACTGTAATTCTTCTATTACTTTCACTACCAGTATTAGCTGGAGCAATTACAATGTTATTAACTGACCGAAACCTAAATACTTCATTTTTTGACCCAACTGGAGGAGGTGATCCTATCTTATACCAACATTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "KU204228",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "JQ035523",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "KC138452",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308152",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308322",
"identity": 0.994,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
1.0
|
id |
ece53ed0-0ce2-4b3c-abb1-23eff8848a01
|
scientificName |
Balanus trigonus
|
AphiaID |
106223
|
eventDate |
2023-05-31
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
eventID |
SUVA1_20230531_WB
|
materialSampleID |
USP-24-01-123
|
target_gene |
COI
|
DNA_sequence |
TCTCTCTAGAAATATTGCTCATTCAGGAGCTTCCGTAGATTTATCGATTTTTTCTTTACACTTAGCGGGAGCTTCATCAATTTTAGGAGCTATTAATTTTATATCAACTGTTATTAATATACGAGCTGAAACATTAACATTTGATCGTCTTCCATTATTTGTGTGAAGAGTATTTATTACTGTAATTCTTCTATTACTTTCACTACCAGTATTAGCTGGAGCAATTACAATGTTATTAACTGACCGAAACCTAAATACTTCATTTTTTGACCCAACTGGAGGAGGTGACCCTATCTTATACCAACATTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "JQ035523",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308152",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308322",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MW277822",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "KU204234",
"identity": 0.997,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
1.0
|
id |
1e247089-801a-46a8-a74f-4838c0f36fbb
|
scientificName |
Balanus trigonus
|
AphiaID |
106223
|
eventDate |
2023-05-31
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
eventID |
SUVA1_20230531_WC
|
materialSampleID |
USP-24-01-124
|
target_gene |
COI
|
DNA_sequence |
TCTCTCTAGAAATATTGCTCATTCAGGAGCTTCCGTAGATTTATCGATTTTCTCTTTACACTTAGCGGGAGCTTCATCAATTTTAGGAGCTATTAATTTTATATCAACTGTTATTAATATGCGAGCTGAAACATTAACATTTGATCGTCTTCCATTATTTGTGTGAAGAGTGTTTATTACTGTAATTCTTCTATTACTTTCACTACCAGTATTAGCTGGAGCAATTACAATGTTATTAACTGACCGAAACCTAAATACTTCATTTTTTGACCCAACTGGAGGAGGTGACCCTATCTTATACCAACATTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "JQ035523",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308152",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308322",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MW277822",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "KC138452",
"identity": 0.99,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
331.0
|
id |
1bd15d3a-fdd2-4122-ac17-06f14cc4d18f
|
scientificName |
Balanus trigonus
|
AphiaID |
106223
|
eventDate |
2023-05-31
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
eventID |
SUVA1_20230531_WC
|
materialSampleID |
USP-24-01-124
|
target_gene |
COI
|
DNA_sequence |
TCTCTCAAGAAATATTGCTCATTCAGGAGCTTCCGTAGATTTATCGATTTTTTCTTTACACTTAGCGGGAGCTTCATCAATTTTAGGAGCTATTAATTTTATATCAACTGTTATTAATATGCGAGCTGAAACATTAACATTTGATCGTCTTCCATTATTTGTGTGAAGAGTGTTTATTACTGTAATTCTTCTATTACTTTCACTACCAGTATTAGCTGGAGCAATTACAATGTTATTAACTGACCGAAACCTAAATACTTCATTTTTTGACCCAACTGGAGGAGGTGACCCTATCTTATACCAACATTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "JQ035523",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308152",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308322",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MW277822",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "KC138452",
"identity": 0.99,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
2.0
|
id |
91aa7bfe-44c2-462d-a762-2419b15d3e69
|
scientificName |
Balanus trigonus
|
AphiaID |
106223
|
eventDate |
2023-05-31
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
eventID |
SUVA1_20230531_WB
|
materialSampleID |
USP-24-01-123
|
target_gene |
COI
|
DNA_sequence |
TCTCTCTAGAAATATTGCTCACTCAGGAGCTTCCGTAGATTTATCAATTTTTTCTTTACACTTAGCGGGAGCTTCATCAATTTTAGGAGCTATTAATTTTATATCAACTGTTATTAATATGCGAGCTGAAACATTAACATTTGATCGTCTTCCATTATTTGTGTGAAGAGTATTTATTACTGTAATTCTTCTATTACTTTCACTACCAGTATTAGCTGGAGCAATTACAATGTTATTAACTGACCGAAACCTAAATACTTCATTTTTTGACCCAACTGGAGGAGGTGACCCTATCTTATACCAACATTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "JQ035523",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308152",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308322",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MW277822",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "KC138452",
"identity": 0.99,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
1.0
|
id |
9dbcba41-107b-4975-93f7-ad450dfbff14
|
scientificName |
Balanus trigonus
|
AphiaID |
106223
|
eventDate |
2023-05-31
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
eventID |
SUVA1_20230531_WB
|
materialSampleID |
USP-24-01-123
|
target_gene |
COI
|
DNA_sequence |
TCTCTCTAGAAATATTGCTCACTCAGGAGCTTCCGTAGATTTATCGATTTTTTCTTTACACTTAGCGGGAGCTTCATCAATTTTAGGAGCTATTAATTTTATATCAACTGTTATTAATATGCGAGCTGAAACATTAACATTTGATCGTCTTCCATTATTTGTGTGAAGAGTATTTATTACTGTAATTCTCCTATTACTTTCACTACCAGTATTAGCTGGAGCAATTACAATGTTATTAACTGACCGAAACCTAAATACTTCATTTTTTGACCCAACTGGAGGAGGTGACCCTATCTTATACCAACATTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "JQ035523",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308152",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308322",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MW277822",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "KC138452",
"identity": 0.99,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
1.0
|
id |
51b5e084-ebb2-4456-8360-410e2b8d4f4f
|
scientificName |
Balanus trigonus
|
AphiaID |
106223
|
eventDate |
2023-05-31
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
eventID |
SUVA1_20230531_WB
|
materialSampleID |
USP-24-01-123
|
target_gene |
COI
|
DNA_sequence |
TCTCTCCAGAAATATTGCTCACTCAGGAGCTTCCGTAGATTTATCGATTTTTTCTTTACACTTAGCGGGAGCTTCATCAATTTTAGGAGCTATTAATTTTATATCAACTGTTATTAATATACGAGCTGAAACATTAACATTTGATCGTCTTCCATTATTTGTGTGAAGAGTATTTATTACTGTAATTCTTCTATTACTTTCACTACCAGTATTAGCTGGAGCAATTACAATGTTATTAACTGACCGAAACCTAAATACTTCATTTTTTGACCCAACTGGAGGAGGTGACCCTATCTTATACCAACATTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "JQ035523",
"identity": 0.99,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308152",
"identity": 0.99,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308322",
"identity": 0.99,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MW277822",
"identity": 0.99,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "KU204234",
"identity": 0.99,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
1.0
|
id |
69f14c82-a7a4-467b-9126-03b66ae8f07e
|
scientificName |
Balanus trigonus
|
AphiaID |
106223
|
eventDate |
2023-05-31
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
eventID |
SUVA1_20230531_WB
|
materialSampleID |
USP-24-01-123
|
target_gene |
COI
|
DNA_sequence |
TCTCTCTAGAAATATTGCTCATTCAGGAGCTTCCGTAGATTTATCGATTTTTTCTTTACACTTAGCGGGAGCTTCATCAATTTTAGGAGCTATTAATTTTATATCAACTGTTATTAATATACGAGCTGAAACATTAACATTTGATCGTCTTCCATTATTTGTGTGGAGAGTATTTATTACTGTAATTTTACTATTACTTTCACTACCAGTATTAGCTGGAGCAATTACAATGTTATTAACTGACCGAAACCTAAATACTTCATTTTTTGACCCAACTGGAGGAGGTGACCCTATTTTATACCAACATTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "KU204332",
"identity": 0.987,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "JQ035523",
"identity": 0.984,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "KU204377",
"identity": 0.984,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308152",
"identity": 0.984,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308322",
"identity": 0.984,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
6.0
|
id |
b34f42c9-c743-4a38-821a-08a7d584c2a0
|
scientificName |
Balanus trigonus
|
AphiaID |
106223
|
eventDate |
2023-05-31
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
eventID |
SUVA1_20230531_WA
|
materialSampleID |
USP-24-01-122
|
target_gene |
COI
|
DNA_sequence |
TCTCTCTAGAAATATTGCTCATTCAGGAGCTTCCGTAGATTTATCGATTTTTTCTTTACACTTAGCGGGAGCTTCATCAATTTTAGGAGCTATTAATTTTATATCAACTGTTATTAATATACGAGCTGAAACATTAACATTTGATCGTCTTCCATTATTTGTGTGGAGAGTATTTATTACTGTAATTTTACTATTACTTTCACTACCAGTATTAGCTGGAGCAATTACAATGTTATTAACTGACCGAAACCTAAATACTTCATTTTTTGACCCAACTGGAGGAGGTGACCCTATTTTATACCAACATTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "KU204332",
"identity": 0.987,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "JQ035523",
"identity": 0.984,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "KU204377",
"identity": 0.984,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308152",
"identity": 0.984,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Balanus trigonus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:106223",
"accession": "MK308322",
"identity": 0.984,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
2.0
|
|