PacMAN decision support system

Potential detection of Ascidia gemmata in Fiji

Description:

Potential detection of Ascidia gemmata with confidence low on 2022-02-16 in material sample S133, marker COI

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Ascidia gemmata
Chordata > Ascidiacea > Phlebobranchia > Ascidiidae
WoRMS: 249992

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

Reads:

157.0

Names:

Occurrences:

view occurrences

id	763d30c5-ed13-43bc-9eaa-b14e64921c08
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2022-02-16
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S133
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGGTTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTGTTGTCTTTACCCGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACAAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	157.0

id	80d3e13b-20ab-4c91-8586-57b4bc7efca8
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2022-02-16
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S99
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGGTTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCTGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	69.0

id	c8edb1db-7eb7-4343-9f5e-d834dc295a8a
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2022-02-16
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S99
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGGTTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTGTTGTCTTTACCCGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACAAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	64.0

id	8bca757c-926c-4420-bcec-6f44a7c5989c
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2022-02-16
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S133
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGGTTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCTGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	40.0

id	54996d2e-58ba-42ab-8cef-fd15d0d8befc
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2022-02-16
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S133
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGATTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCCGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	15.0

id	823068a6-0056-4dad-ad96-ab3be4f7134a
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2022-02-16
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S133
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACCTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGATTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCCGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	11.0

id	14f5dcea-25b8-4250-b72d-be5ac1b3164c
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2022-02-16
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S112
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGATTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCCGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	2.0

id	876bab71-ab8d-4c86-8a3d-46bd3a270ac8
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2022-02-16
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S99
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGGTTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCCGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	1.0

Ascidia gemmata does not have an offial status in Fiji.

No notes found.