PacMAN decision support system

Potential detection of Diplosoma simile in Fiji

Description:

Potential detection of Diplosoma simile with confidence low on 2022-05-25 in material sample S63, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Diplosoma simile
Chordata > Ascidiacea > Aplousobranchia > Didemnidae
WoRMS: 250415

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

20.0

Names:

Occurrences:

view occurrences

id	4381c863-d861-47dc-ac51-52d910e658f0
scientificName	Diplosoma
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S63
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	20.0

id	2c6656e6-653a-4735-8dc0-56b29bfb53bb
scientificName	Diplosoma
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S65
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	16.0

id	151a341e-0950-48bb-af42-aa0ef2357fd9
scientificName	Diplosoma
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S46
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	10.0

id	45a12164-6369-4948-8370-2fcbd75c75a3
scientificName	Diplosoma
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S45
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	9.0

id	3c36d3fc-429e-47d7-9c61-6f2cda7a777b
scientificName	Diplosoma
eventDate	2022-05-25
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S47
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	8.0

id	309b0804-1677-4253-aaf0-e3d255b423ae
scientificName	Diplosoma
eventDate	2022-05-25
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S48
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	6.0

Diplosoma simile in Fiji

Status

Diplosoma simile does not have an offial status in Fiji.

Notes

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