Occurrences: |
view occurrences
id |
cee330e3-0071-48fe-bc4d-e49930a2d4e6
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-01
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268456.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268457.1.1758_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268458.1.1766_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
12527.0
|
id |
e446037c-cf83-4ccb-a075-5218e07646c3
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-07
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268456.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268457.1.1758_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268458.1.1766_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
6511.0
|
id |
8225e63b-cea0-4d73-9468-16cf1b6e15dc
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-04
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268456.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268457.1.1758_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268458.1.1766_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
3771.0
|
id |
c05edfbc-5d52-4af5-9d4a-6e91190398a5
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-10
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268456.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268457.1.1758_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268458.1.1766_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
1809.0
|
id |
c0ae1582-2778-4baf-9d63-fd104730bc4e
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-05
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268456.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268457.1.1758_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268458.1.1766_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
1411.0
|
id |
7310f35b-a4bc-412f-b1c1-7f8570fb1eff
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-06
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268456.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268457.1.1758_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268458.1.1766_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
794.0
|
id |
a2f31d70-d9d2-40bd-a2a2-56722d9e73b6
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-11
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268456.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268457.1.1758_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268458.1.1766_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
126.0
|
id |
2baa5a02-6d8e-4ed1-ace2-f14561052847
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-02
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268456.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268457.1.1758_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268458.1.1766_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
23.0
|
id |
3a226478-e121-4560-ab23-b200ef235ca3
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-20
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268456.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268457.1.1758_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268458.1.1766_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
5.0
|
id |
de314765-e085-45ea-a840-d800702393f2
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-13
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268456.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268457.1.1758_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268458.1.1766_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
5.0
|
id |
af0ecded-013a-4dd8-9b1a-1fa8168c13f2
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-12
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268456.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268457.1.1758_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268458.1.1766_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
3.0
|
id |
e0182c7a-1ad4-4f9e-89ae-1580c740dd9d
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-08
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268456.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268457.1.1758_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268458.1.1766_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
3.0
|
id |
a19543a1-418c-457e-85a2-1c15faaaf7db
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-16
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268456.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268457.1.1758_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268458.1.1766_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
2.0
|
id |
b19bb2ae-b4fe-4604-b61a-4d4c892e7630
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-19
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268456.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268457.1.1758_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268458.1.1766_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
2.0
|
id |
23e08da1-4ab8-46bd-9708-805d731f212d
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-15
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268456.1.1746_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268457.1.1758_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268458.1.1766_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
organismQuantity |
1.0
|
id |
ec4257ab-875b-430c-b20b-e66026132da4
|
scientificName |
Phallusia
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-10
|
target_gene |
18S
|
DNA_sequence |
TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACGGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACTAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103485",
"confidence": 0.82
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "FM244845.1.1805_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_ceratodes",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:249976",
"accession": "L12378.1.1821_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Corella_eumyota",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:173223",
"accession": "FM244846.1.1733_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 0.994,
"query_cover": 0.9938
}
]
}
|
organismQuantity |
332.0
|
id |
f1bc500a-ca53-46bc-9320-8dbb0a36b168
|
scientificName |
Phallusia
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-01
|
target_gene |
18S
|
DNA_sequence |
TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACGGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACTAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103485",
"confidence": 0.82
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "FM244845.1.1805_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_ceratodes",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:249976",
"accession": "L12378.1.1821_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Corella_eumyota",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:173223",
"accession": "FM244846.1.1733_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 0.994,
"query_cover": 0.9938
}
]
}
|
organismQuantity |
82.0
|
id |
b11121b0-2cea-4090-abd5-c6ce07b202b7
|
scientificName |
Phallusia
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-07
|
target_gene |
18S
|
DNA_sequence |
TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACGGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACTAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103485",
"confidence": 0.82
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "FM244845.1.1805_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_ceratodes",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:249976",
"accession": "L12378.1.1821_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Corella_eumyota",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:173223",
"accession": "FM244846.1.1733_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 0.994,
"query_cover": 0.9938
}
]
}
|
organismQuantity |
74.0
|
id |
9ad88fd9-cf35-4ab4-a028-24327d1d5711
|
scientificName |
Phallusia
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-04
|
target_gene |
18S
|
DNA_sequence |
TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACGGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACTAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103485",
"confidence": 0.82
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "FM244845.1.1805_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_ceratodes",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:249976",
"accession": "L12378.1.1821_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Corella_eumyota",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:173223",
"accession": "FM244846.1.1733_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 0.994,
"query_cover": 0.9938
}
]
}
|
organismQuantity |
3.0
|
id |
c45818e1-33ee-435d-8fb6-f0b9aabf1d6d
|
scientificName |
Phallusia
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-16
|
target_gene |
18S
|
DNA_sequence |
TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACGGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACTAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103485",
"confidence": 0.82
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "FM244845.1.1805_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_ceratodes",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:249976",
"accession": "L12378.1.1821_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Corella_eumyota",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:173223",
"accession": "FM244846.1.1733_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 0.994,
"query_cover": 0.9938
}
]
}
|
organismQuantity |
2.0
|
id |
e70fc4dd-91cd-4b62-816b-b43bdc11a1ae
|
scientificName |
Phallusia
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-06
|
target_gene |
18S
|
DNA_sequence |
TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACGGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACTAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103485",
"confidence": 0.82
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "FM244845.1.1805_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_ceratodes",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:249976",
"accession": "L12378.1.1821_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Corella_eumyota",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:173223",
"accession": "FM244846.1.1733_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 0.994,
"query_cover": 0.9938
}
]
}
|
organismQuantity |
2.0
|
id |
15f693e8-fc66-4092-8d91-286898625e81
|
scientificName |
Phallusia
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-08
|
target_gene |
18S
|
DNA_sequence |
TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACGGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACTAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103485",
"confidence": 0.82
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "FM244845.1.1805_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_ceratodes",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:249976",
"accession": "L12378.1.1821_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Corella_eumyota",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:173223",
"accession": "FM244846.1.1733_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 0.994,
"query_cover": 0.9938
}
]
}
|
organismQuantity |
1.0
|
id |
4b307895-2a2c-4b16-b989-9e3e5b0ff053
|
scientificName |
Phallusia
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-02
|
target_gene |
18S
|
DNA_sequence |
TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACGGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACTAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103485",
"confidence": 0.82
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "FM244845.1.1805_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_ceratodes",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:249976",
"accession": "L12378.1.1821_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Corella_eumyota",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:173223",
"accession": "FM244846.1.1733_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 0.994,
"query_cover": 0.9938
}
]
}
|
organismQuantity |
1.0
|
id |
c87983a0-e3ae-4a58-86f1-73e52f150f82
|
scientificName |
Phallusia
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-05
|
target_gene |
18S
|
DNA_sequence |
TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACGGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACTAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103485",
"confidence": 0.82
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "FM244845.1.1805_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_ceratodes",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:249976",
"accession": "L12378.1.1821_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Corella_eumyota",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:173223",
"accession": "FM244846.1.1733_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 0.994,
"query_cover": 0.9938
}
]
}
|
organismQuantity |
1.0
|
id |
d73f7784-fe3b-425e-b546-079c4af3a105
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-01
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGGCTCGCCTGAATAATGGTGCATGGAATAATGGAATAGGACCTCGGTTCTATTTTGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACGGACGGGGGCATTCGTACTGTGCCGTTAGAGGTGAAATTCTTGGATCGGCGCAAGACGAACGACTGCGAAAGCATTTGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 0.99
}
]
}
|
organismQuantity |
63.0
|
id |
b88e8c42-4ed4-4fec-b14f-eff091a98f12
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2023-04-27
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
USP-24-01-01
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGGCTCGCCTGAATAATGGTGCATGGAATAATGGAATAGGACCAGAGGTTCG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 0.99
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268455.1.1746_U",
"identity": 0.985,
"query_cover": 0.9962
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268456.1.1746_U",
"identity": 0.985,
"query_cover": 0.9962
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268457.1.1758_U",
"identity": 0.985,
"query_cover": 0.9962
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268458.1.1766_U",
"identity": 0.985,
"query_cover": 0.9962
},
{
"method": "VSEARCH",
"scientificName": "Phallusia_nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"accession": "KF268459.1.1757_U",
"identity": 0.985,
"query_cover": 0.9962
}
]
}
|
organismQuantity |
38.0
|
id |
62e03446-a874-4af5-8c2f-6fd1d5f4ce96
|
scientificName |
Phallusia nigra
|
AphiaID |
103725
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
USP-24-01-07
|
target_gene |
18S
|
DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAGGCGTGCACTGGCCGCACCTGGCCCTCGCCCCCGGCGCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGGCTCGCCTGAATAATGGTGCATGGAATAATGGAATAGGACC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Phallusia nigra",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103725",
"confidence": 1
}
]
}
|
organismQuantity |
1.0
|
|