Occurrences: |
view occurrences
id |
dcee402a-edce-419a-92d2-b3e6de054ac9
|
scientificName |
Monetaria annulus
|
AphiaID |
216875
|
eventDate |
2022-10-03
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
S165
|
target_gene |
COI
|
DNA_sequence |
TTTAGCCGGAAACCTTGCTCACGCAGGTGGGTCTGTAGATCTAGCTATTTTTTCTCTCCACCTAGCAGGTGTCTCATCTATTCTAGGTGCTGTAAACTTCATTACAACTATTATTAACATACGATGACGAGGCATGCAGTTTGAACGACTTCCCCTATTTGTATGATCTGTGAAAATTACTGCCATCCTACTTCTCCTCTCTCTACCAGTTTTAGCAGGTGCTATTACAATGTTATTAACAGACCGAAACTTTAACACCGCTTTCTTTGATCCAGCAGGAGGTGGAGACCCTATTTTATACCAACACCTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ206999",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MN389075",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MZ559397",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MZ560055",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria obvelata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:570809",
"accession": "DQ206996",
"identity": 0.997,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
149.0
|
id |
748e7f0c-4966-4d1c-9d58-27b43820db78
|
scientificName |
Monetaria annulus
|
AphiaID |
216875
|
eventDate |
2022-10-03
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
S165
|
target_gene |
COI
|
DNA_sequence |
TTTAGCCGGAAACCTTGCTCACGCAGGTGGGTCTGTAGATCTAGCTATTTTTTCTCTCCACCTAGCAGGTGTCTCATCTATTCTAGGTGCTGTAAACTTCATTACAACTATTATTAACATACGATGACGAGGCATGCAGTTTGAACGACTTCCCCTATTTGTATGATCTGTGAAAATTACTGCCATCCTACTTCTCCTCTCTCTACCAGTTTTAGCAGGTGCTATTACAATGTTATTAACAGACCGAAACTTTAACACCGCTTTCTTTGATCCAGCAGGAGGTGGAGACCCTATTTTATATCAACACCTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ206999",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria obvelata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:570809",
"accession": "DQ206996",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ206998",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MN389075",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MZ559397",
"identity": 0.994,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
138.0
|
id |
840598d2-3a87-4ce5-8c66-ad6b011171b2
|
scientificName |
Monetaria annulus
|
AphiaID |
216875
|
eventDate |
2022-10-03
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
S165
|
target_gene |
COI
|
DNA_sequence |
TTTAGCCGGAAACCTTGCTCACGCAGGTGGGTCTGTAGATCTAGCTATTTTTTCTCTCCACCTAGCAGGTGTCTCATCTATTCTGGGTGCTGTAAACTTCATTACAACTATTATTAACATACGATGACGAGGCATGCAGTTTGAACGACTTCCCCTATTTGTATGATCTGTGAAAATTACTGCCATCCTACTTCTCCTCTCTCTACCAGTTTTAGCAGGTGCTATTACAATGTTATTAACAGACCGAAACTTTAACACCGCTTTCTTTGATCCAGCAGGAGGTGGAGACCCTATTTTATACCAACACCTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ206998",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ324060",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MZ559430",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MZ560054",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ206995",
"identity": 0.997,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
27.0
|
id |
16442a91-8c67-400d-a517-bcbec18c3f9c
|
scientificName |
Monetaria annulus
|
AphiaID |
216875
|
eventDate |
2022-10-03
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
S165
|
target_gene |
COI
|
DNA_sequence |
TTTAGCCGGAAACCTTGCTCACGCAGGTGGGTCTGTAGATCTAGCTATTTTTTCTCTCCACCTAGCAGGTGTCTCATCTATTCTGGGTGCTGTAAACTTCATTACAACTATTATTAACATACGATGACGAGGCATGCAGTTTGAACGACTTCCCCTATTTGTATGATCTGTGAAAATTACTGCCATCCTACTTCTCCTCTCTCTACCAGTTTTAGCAGGTGCTATTACAATGTTATTAACAGACCGAAACTTTAACACCGCTTTCTTTGATCCAGCGGGAGGTGGAGACCCTATTTTATACCAACACCTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ206998",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ324060",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MZ559430",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MZ560054",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ206995",
"identity": 0.993,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
1.0
|
|