PacMAN decision support system

Potential detection of Symplegma brakenhielmi in Fiji

Description:

Potential detection of Symplegma brakenhielmi with confidence medium on 2022-05-25 in material sample S154, marker COI

Confidence:

medium

Risk:

medium view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Symplegma brakenhielmi
Chordata > Ascidiacea > Stolidobranchia > Styelidae
WoRMS: 251435

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

0.996

Reads:

3854.0

Names:

Occurrences:

view occurrences

id	fd62e0df-9cb0-4e04-90e6-f8f0b62793ad
scientificName	Symplegma brakenhielmi
AphiaID	251435
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S154
target_gene	COI
DNA_sequence	TCTTTCTGGGAATTTAGCTCATTCTGGGGCTGCCCTTGATTGTGCTATTTTTTCTTTACATTTGGCAAGGGTTTCTAGTATTTTGAGATCTTTGAATTTTATGACTACTTTGTTTAATATAAAAAGTAAAGGATGAGGGTTGTTTAATATGTCTTTGTTTTGTTGGACTGTTTTAGTGACTACTGTCTTGTTGCTTTTGTCTTTGCCGGTTTTGGCAGCTGCTATTACTATGTTGTTGTTTGATCGGAACTTTAATTCTTCTTTTTTTGATCCTTCTGGTGGAGGAGATCCTGTTCTTTATCAGCATTTATTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "accession": "KT276224", "identity": 0.996, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "accession": "KT276228", "identity": 0.99, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "accession": "LS992554", "identity": 0.981, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "accession": "OM912785", "identity": 0.981, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "accession": "OM912786", "identity": 0.981, "query_cover": 0.9968 } ] }
organismQuantity	3854.0

id	a8dd4f7a-aff2-480d-8b47-3a5062168abb
scientificName	Symplegma brakenhielmi
AphiaID	251435
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S136
target_gene	COI
DNA_sequence	TCTTTCTGGGAATTTAGCTCATTCTGGGGCTGCCCTTGATTGTGCTATTTTTTCTTTACATTTGGCAAGGGTTTCTAGTATTTTGAGATCTTTGAATTTTATGACTACTTTGTTTAATATAAAAAGTAAAGGATGAGGGTTGTTTAATATGTCTTTGTTTTGTTGGACTGTTTTAGTGACTACTGTCTTGTTGCTTTTGTCTTTGCCGGTTTTGGCAGCTGCTATTACTATGTTGTTGTTTGATCGGAACTTTAATTCTTCTTTTTTTGATCCTTCTGGTGGAGGAGATCCTGTTCTTTATCAGCATTTATTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "accession": "KT276224", "identity": 0.996, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "accession": "KT276228", "identity": 0.99, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "accession": "LS992554", "identity": 0.981, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "accession": "OM912785", "identity": 0.981, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "accession": "OM912786", "identity": 0.981, "query_cover": 0.9968 } ] }
organismQuantity	5.0

id	fa3ee637-4d6b-4011-a7d2-0dc962399964
scientificName	Symplegma brakenhielmi
AphiaID	251435
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S155
target_gene	COI
DNA_sequence	TCTTTCTGGGAATTTAGCTCATTCTGGGGCTGCCCTTGATTGTGCTATTTTTTCTTTACATTTGGCAAGGGTTTCTAGTATTTTGAGATCTTTGAATTTTATGACTACTTTGTTTAATATAAAAAGTAAAGGATGAGGGTTGTTTAATATGTCTTTGTTTTGTTGGACTGTTTTAGTGACTACTGTCTTGTTGCTTTTGTCTTTGCCGGTTTTGGCAGCTGCTATTACTATGTTGTTGTTTGATCGGAACTTTAATTCTTCTTTTTTTGATCCTTCTGGTGGAGGAGATCCTGTTCTTTATCAGCATTTATTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "accession": "KT276224", "identity": 0.996, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "accession": "KT276228", "identity": 0.99, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "accession": "LS992554", "identity": 0.981, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "accession": "OM912785", "identity": 0.981, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "accession": "OM912786", "identity": 0.981, "query_cover": 0.9968 } ] }
organismQuantity	1.0

id	90a61b0c-ee01-422e-a1eb-63e883fa4a80
scientificName	Symplegma brakenhielmi
AphiaID	251435
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S154
target_gene	COI
DNA_sequence	TCTTTCTAGGAACTTAGCTCATTCTAGGGCTGCCCTTGATTGTGCTATTTTTTCTTTACATTTGGCAAGGGTTTCTAGTATTTTGAGATCTTTGAATTTTATGACTACTTTGTTTAATATAAAGAGTAAAGGATGAAGGTTATTTAATATGTCTTTGTTTTGTTGGACTGTTTTAGTTACTACTGTCTTGTTGCTTTTGTCCTTGCCGGTTTTGGCAGCTGCTATTACTATGTTGTTGTTTGATCGTAATTTTAATTCTTCTTTTTTTGATCCTTCTGGTGGAGGAGATCCTGTTCTTTATCAGCATTTATTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "confidence": 0.87 } ] }
organismQuantity	2013.0

id	e58c95fe-3741-4038-b02b-6e10bf6787bd
scientificName	Symplegma brakenhielmi
AphiaID	251435
eventDate	2022-05-25
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S152
target_gene	COI
DNA_sequence	TCTTTCTAGGAACTTAGCTCATTCTAGGGCTGCCCTTGATTGTGCTATTTTTTCTTTACATTTGGCAAGGGTTTCTAGTATTTTGAGATCTTTGAATTTTATGACTACTTTGTTTAATATAAAGAGTAAAGGATGAAGGTTATTTAATATGTCTTTGTTTTGTTGGACTGTTTTAGTTACTACTGTCTTGTTGCTTTTGTCCTTGCCGGTTTTGGCAGCTGCTATTACTATGTTGTTGTTTGATCGTAATTTTAATTCTTCTTTTTTTGATCCTTCTGGTGGAGGAGATCCTGTTCTTTATCAGCATTTATTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "confidence": 0.87 } ] }
organismQuantity	99.0

id	9d947bd6-1b6e-4570-a144-d88edc3c3444
scientificName	Symplegma brakenhielmi
AphiaID	251435
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S153
target_gene	COI
DNA_sequence	TCTTTCTAGGAACTTAGCTCATTCTAGGGCTGCCCTTGATTGTGCTATTTTTTCTTTACATTTGGCAAGGGTTTCTAGTATTTTGAGATCTTTGAATTTTATGACTACTTTGTTTAATATAAAGAGTAAAGGATGAAGGTTATTTAATATGTCTTTGTTTTGTTGGACTGTTTTAGTTACTACTGTCTTGTTGCTTTTGTCCTTGCCGGTTTTGGCAGCTGCTATTACTATGTTGTTGTTTGATCGTAATTTTAATTCTTCTTTTTTTGATCCTTCTGGTGGAGGAGATCCTGTTCTTTATCAGCATTTATTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "confidence": 0.87 } ] }
organismQuantity	95.0

id	170443da-e25c-4ddd-a355-cdbebcb79e63
scientificName	Symplegma brakenhielmi
AphiaID	251435
eventDate	2022-05-25
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S138
target_gene	COI
DNA_sequence	TCTTTCTAGGAACTTAGCTCATTCTAGGGCTGCCCTTGATTGTGCTATTTTTTCTTTACATTTGGCAAGGGTTTCTAGTATTTTGAGATCTTTGAATTTTATGACTACTTTGTTTAATATAAAGAGTAAAGGATGAAGGTTATTTAATATGTCTTTGTTTTGTTGGACTGTTTTAGTTACTACTGTCTTGTTGCTTTTGTCCTTGCCGGTTTTGGCAGCTGCTATTACTATGTTGTTGTTTGATCGTAATTTTAATTCTTCTTTTTTTGATCCTTCTGGTGGAGGAGATCCTGTTCTTTATCAGCATTTATTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Symplegma brakenhielmi", "scientificNameID": "urn:lsid:marinespecies.org:taxname:251435", "confidence": 0.87 } ] }
organismQuantity	8.0

Symplegma brakenhielmi in Fiji

Status

Symplegma brakenhielmi does not have an offial status in Fiji.

Notes

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