Occurrences: |
view occurrences
id |
73488e1b-2440-4090-9d68-31aafc306097
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-05-25
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S153
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGTATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATCAGATCAATTTTCAGGTCAATTAACTTTATGGTAACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTCTTATTACTTACCACTCTTCCAGTATTGGCTGGCGGGTTGACTATGTTACTGACGGATCGACATTTTAATACTTCTTTCTTCGATCCAGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.987,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.987,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
2973.0
|
id |
ab4573bf-cbc5-4ec4-926f-2a81809b0a59
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-05-25
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S154
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGTATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTCAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGGTCTATTAAAGTGACTTCATTCTTATTACTTACCACTCTTCCAGTATTGGCTGGCGGGTTGACTATGTTACTGACGGATCGACATTTTAATACTTCTTTCTTCGATCCAGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.99,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.99,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
2874.0
|
id |
c7ec0bca-63a4-4964-9641-254231930c0b
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-05-25
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S153
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGCATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTCTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.98,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.98,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
2179.0
|
id |
a0da2d1e-2b47-4fb4-8f24-6e31a672988c
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-05-25
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S153
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGTATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTCAGGTCAATTAACTTTATGGTGACAATTACTAACATACGATCAGTAGATGGCCATTTACTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTACTACTTACCACTCTTCCAGTGCTGGCTGGTGGGTTGACTATGTTGCTGACGGATCGACATTTCAATACTTCTTTCTTTGATCCGGTAGGAGGCGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
}
]
}
|
organismQuantity |
957.0
|
id |
1d7b791d-c2be-4cc2-b8f2-c3e713f594c9
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-05-25
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S154
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGCATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTCTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTCCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.977,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.977,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
672.0
|
id |
b63a46cf-da76-42ab-9d5e-fb657a1322ad
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-05-25
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
S152
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGTATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGCGGGTTGACTATGTTACTGACGGATCGGCATTTTAATACTTCTTTCTTCGATCCAGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.99,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.99,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
616.0
|
id |
38496e49-de13-4357-8c67-4597ac8c522e
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-05-25
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S153
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGCATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTCTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTCCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.977,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.977,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
14.0
|
id |
94fbad31-8f92-4bd6-bbe2-5cc102224f56
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-05-25
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
S152
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGCATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGCGGGTTGACTATGTTACTGACGGATCGGCATTTTAATACTTCTTTCTTCGATCCAGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.987,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.987,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
11.0
|
id |
a75de325-89ba-45be-a3fa-ae61d0cc38c4
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-05-25
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S154
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGCATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTCTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.98,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.98,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
10.0
|
id |
71cac731-1a74-4414-a688-20fe7365542a
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-05-25
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S153
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGCATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATCTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTCTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.977,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.977,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
9.0
|
id |
7cc443e9-4a42-44f8-8fc1-ed157991f6f6
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-05-25
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S153
|
target_gene |
COI
|
DNA_sequence |
TGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTCTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 0.99
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.973,
"query_cover": 0.9933
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.973,
"query_cover": 0.9933
}
]
}
|
organismQuantity |
6.0
|
id |
ec939644-1d18-4bf8-8c5f-a5c5d5255b5c
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-05-25
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
S152
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGTATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGCGGGTTGACTATGTTACTGACGGATCGACATTTTAATACTTCTTTCTTCGATCCAGTAGGAGGTGGTGACCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.99,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.99,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
5.0
|
id |
6a227134-07d8-4e8e-9c36-05192ba5fe59
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-05-25
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S154
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGTATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTCAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGGTCTATTAAAGTGACTTCATTCTTATTACTTACCACTCTTCCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.99,
"query_cover": 0.995
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.99,
"query_cover": 0.995
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea sandvichensis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:506713",
"accession": "MN608290",
"identity": 0.985,
"query_cover": 0.995
}
]
}
|
organismQuantity |
4.0
|
id |
73c8fe14-bc3e-4b2e-857f-b995b2c48dc2
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-05-25
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S154
|
target_gene |
COI
|
DNA_sequence |
TGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTCTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 0.99
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.973,
"query_cover": 0.9933
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.973,
"query_cover": 0.9933
}
]
}
|
organismQuantity |
4.0
|
id |
19846e37-626e-4995-8a20-c65f371362d8
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-05-25
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S155
|
target_gene |
COI
|
DNA_sequence |
TGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTCTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 0.99
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.973,
"query_cover": 0.9933
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.973,
"query_cover": 0.9933
}
]
}
|
organismQuantity |
2.0
|
id |
72110b24-671f-48ef-92e7-696ed949159f
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-05-25
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
S152
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGTATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTCTTCGACCCGGTAGGTGGGGGTGATCCTGTTTTATTTCAGCACTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 0.99
}
]
}
|
organismQuantity |
2.0
|
id |
8dce6767-c6b2-4aea-bbe4-e79bf7970e23
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-05-25
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S135
|
target_gene |
COI
|
DNA_sequence |
TTTGTCTACTTTCTCATATCACGGAATGTGCATGGATTTGGCCATTTTAAGACTTCATTTAGCCGGAATTAGATCAATTTTTAGGTCAATTAACTTTGTAGTAACAATTACTAATATACGGTCAGTAGATGGCCACTTGTTAGCTTTATTTCCTTGGTCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTCTTAGCTGGTGGGTTAACTATGTTACTGACAGATCGACATTTTAACACTTCTTTCTTTGACCCAGTAGGGGGTGGTGATCCGGTTTTATTCCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 0.81
}
]
}
|
organismQuantity |
2.0
|
id |
ad8323c7-bed3-41e8-9495-840ed5fa2d4f
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-05-25
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
S152
|
target_gene |
COI
|
DNA_sequence |
TGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTCTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 0.99
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.973,
"query_cover": 0.9933
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.973,
"query_cover": 0.9933
}
]
}
|
organismQuantity |
2.0
|
id |
fc65c048-e493-409a-b367-6fd06b156602
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-05-25
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S153
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGTATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTCAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGGTCTATTAAAGTGACTTCATTCTTATTACTTACCACTCTTCCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.99,
"query_cover": 0.995
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.99,
"query_cover": 0.995
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea sandvichensis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:506713",
"accession": "MN608290",
"identity": 0.985,
"query_cover": 0.995
}
]
}
|
organismQuantity |
2.0
|
id |
26bb4d65-0edd-4d40-a155-edbddb61ac8f
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-05-25
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S153
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGCATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTTTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.977,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.977,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
1.0
|
id |
2cbf16ba-16b1-4f73-bb6f-4f24049007f2
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-05-25
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S135
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGCATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTTTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.977,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.977,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
1.0
|
id |
d392b4a5-46d3-471e-b4d0-2493888eebd5
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-05-25
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
materialSampleID |
S154
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGTATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGCGGGTTGACTATGTTACTGACGGATCGACATTTTAATACTTCTTTCTTCGATCCAGTAGGAGGTGGTGACCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.99,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.99,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
1.0
|
|