PacMAN decision support system

Potential detection of Xenostrobus securis in Fiji

Description:

Potential detection of Xenostrobus securis with confidence medium on 2024-02-28 in material sample USP-24-01-195, marker 18S

Confidence:

medium

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Xenostrobus securis
Mollusca > Bivalvia > Mytilida > Mytilidae
WoRMS: 140485

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

17.0

Names:

1

Occurrences:

view occurrences

id	b25c64c5-01e4-4507-95bf-cf4f8530adee
scientificName	Xenostrobus securis
AphiaID	140485
eventDate	2024-02-28
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-195
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTGGCGGTCCGGCGCATGCCGGTTACTGCTTGTCCTGACCTACCTCCCGGTCGCGCCCTTGGTGCTCTTGATTGAGTGTCTCGGGTCGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186010.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186014.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186008.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "DQ984672.1.877_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	17.0

id	aa7ca8cd-261e-49b0-a22c-d47cff4db768
scientificName	Xenostrobus securis
AphiaID	140485
eventDate	2024-02-28
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-193
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTGGCGGTCCGGCGCATGCCGGTTACTGCTTGTCCTGACCTACCTCCCGGTCGCGCCCTTGGTGCTCTTGATTGAGTGTCTCGGGTCGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186010.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186014.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186008.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "DQ984672.1.877_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	16.0

id	5a7a1b56-2b47-4b5d-9f4b-3cd0a77727a7
scientificName	Mytiloides
eventDate	2024-02-28
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-195
target_gene	18S
DNA_sequence	TGCTGGTTTTCGGAGCTCGAGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGATCGCCGTAAGACGAACCGCTGCGAAAGCGTTTGCCAAGAATGTTTTCATTAGTCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Mytiloida", "scientificNameID": "urn:lsid:marinespecies.org:taxname:1506984", "confidence": 0.89 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949125.1.1657_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949134.1.1652_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949124.1.1657_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949130.1.1680_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	12.0

id	2b86ad72-9753-4fb4-ab89-d8beddd456b2
scientificName	Mytiloides
eventDate	2024-02-28
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-193
target_gene	18S
DNA_sequence	TGCTGGTTTTCGGAGCTCGAGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGATCGCCGTAAGACGAACCGCTGCGAAAGCGTTTGCCAAGAATGTTTTCATTAGTCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Mytiloida", "scientificNameID": "urn:lsid:marinespecies.org:taxname:1506984", "confidence": 0.89 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949125.1.1657_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949134.1.1652_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949124.1.1657_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949130.1.1680_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	11.0

id	8886e87d-0146-479f-90ec-f144343679ec
scientificName	Xenostrobus securis
AphiaID	140485
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-197
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTGGCGGTCCGGCGCATGCCGGTTACTGCTTGTCCTGACCTACCTCCCGGTCGCGCCCTTGGTGCTCTTGATTGAGTGTCTCGGGTCGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186010.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186014.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186008.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "DQ984672.1.877_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	10.0

id	6425e0f7-1dfe-482b-9bc8-d9ecc77021ce
scientificName	Xenostrobus securis
AphiaID	140485
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-196
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTGGCGGTCCGGCGCATGCCGGTTACTGCTTGTCCTGACCTACCTCCCGGTCGCGCCCTTGGTGCTCTTGATTGAGTGTCTCGGGTCGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186010.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186014.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186008.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "DQ984672.1.877_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	9.0

id	8a84b7ed-3763-40ad-bc50-c80985a07bcf
scientificName	Mytiloides
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-196
target_gene	18S
DNA_sequence	TGCTGGTTTTCGGAGCTCGAGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGATCGCCGTAAGACGAACCGCTGCGAAAGCGTTTGCCAAGAATGTTTTCATTAGTCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Mytiloida", "scientificNameID": "urn:lsid:marinespecies.org:taxname:1506984", "confidence": 0.89 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949125.1.1657_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949134.1.1652_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949124.1.1657_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949130.1.1680_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	8.0

id	8a9ec35a-56ae-4ca5-a66a-fb8808f3d7ff
scientificName	Mytiloides
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-197
target_gene	18S
DNA_sequence	TGCTGGTTTTCGGAGCTCGAGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGATCGCCGTAAGACGAACCGCTGCGAAAGCGTTTGCCAAGAATGTTTTCATTAGTCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Mytiloida", "scientificNameID": "urn:lsid:marinespecies.org:taxname:1506984", "confidence": 0.89 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949125.1.1657_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949134.1.1652_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949124.1.1657_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949130.1.1680_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	8.0

id	a08f3366-16af-4d9c-879e-41e8a5a21bf9
scientificName	Mytiloides
eventDate	2024-02-28
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-194
target_gene	18S
DNA_sequence	TGCTGGTTTTCGGAGCTCGAGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGATCGCCGTAAGACGAACCGCTGCGAAAGCGTTTGCCAAGAATGTTTTCATTAGTCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Mytiloida", "scientificNameID": "urn:lsid:marinespecies.org:taxname:1506984", "confidence": 0.89 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949125.1.1657_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949134.1.1652_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949124.1.1657_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949130.1.1680_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	8.0

id	d504e060-119a-4abe-923c-e70f9c944637
scientificName	Xenostrobus securis
AphiaID	140485
eventDate	2024-02-28
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-194
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTGGCGGTCCGGCGCATGCCGGTTACTGCTTGTCCTGACCTACCTCCCGGTCGCGCCCTTGGTGCTCTTGATTGAGTGTCTCGGGTCGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186010.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186014.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186008.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "DQ984672.1.877_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	8.0

id	a1d2aa67-ac3b-4d4d-9d6a-8b8da15dc589
scientificName	Mytiloides
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-198
target_gene	18S
DNA_sequence	TGCTGGTTTTCGGAGCTCGAGGTAATGATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGATCGCCGTAAGACGAACCGCTGCGAAAGCGTTTGCCAAGAATGTTTTCATTAGTCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Mytiloida", "scientificNameID": "urn:lsid:marinespecies.org:taxname:1506984", "confidence": 0.89 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949125.1.1657_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949134.1.1652_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949124.1.1657_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949130.1.1680_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	7.0

id	19b755f8-a9de-462c-a4e4-6442a7492a3d
scientificName	Xenostrobus securis
AphiaID	140485
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-198
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTGGCGGTCCGGCGCATGCCGGTTACTGCTTGTCCTGACCTACCTCCCGGTCGCGCCCTTGGTGCTCTTGATTGAGTGTCTCGGGTCGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186010.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186014.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186008.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "DQ984672.1.877_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	4.0

id	f0b7041b-a35c-4d0c-aeda-91ea9cf41e2c
scientificName	Xenostrobus securis
AphiaID	140485
eventDate	2024-02-28
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-92
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTGGCGGTCCGGCGCATGCCGGTTACTGCTTGTCCTGACCTACCTCCCGGTCGCGCCCTTGGTGCTCTTGATTGAGTGTCTCGGGTCGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186010.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "FJ949127.1.1708_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186014.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "EF186008.1.874_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Xenostrobus securis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:140485", "accession": "DQ984672.1.877_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	1.0

Xenostrobus securis in Fiji

Status

Xenostrobus securis does not have an offial status in Fiji.

Notes

No notes found.