| Occurrences: |
view occurrences
| id |
19edeb9c-523e-48f3-8ded-f1f8d7f4cb19
|
| scientificName |
Isognomon
|
| eventDate |
2023-11-28
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| materialSampleID |
USP-24-01-69
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTTGCGGTCCGCTCCTTGGCGGTCACTGCTCGATCCTGACCTACCTCACCGGTTTTTGCCCTTGGTGCTCTTGACTGAGTGTCTCGGGTGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Isognomon",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:138091",
"confidence": 0.99
},
{
"method": "VSEARCH",
"scientificName": "Isognomon spathulata",
"accession": "HQ329348.1.1772_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Isognomon perna",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:208470",
"accession": "AB594388.1.1728_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Isognomon bicolor",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420737",
"accession": "HQ329332.1.1772_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Isognomon ephippium",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:208462",
"accession": "AB594382.1.1731_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Isognomon ephippium",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:208462",
"accession": "HQ329335.1.1773_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
20.0
|
| id |
66ce7b26-0a63-44fd-8352-9e8b6e6913cd
|
| scientificName |
Isognomon
|
| eventDate |
2023-11-28
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| materialSampleID |
USP-24-01-68
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTTGCGGTCCGCTCCTTGGCGGTCACTGCTCGATCCTGACCTACCTCACCGGTTTTTGCCCTTGGTGCTCTTGACTGAGTGTCTCGGGTGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Isognomon",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:138091",
"confidence": 0.99
},
{
"method": "VSEARCH",
"scientificName": "Isognomon spathulata",
"accession": "HQ329348.1.1772_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Isognomon perna",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:208470",
"accession": "AB594388.1.1728_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Isognomon bicolor",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420737",
"accession": "HQ329332.1.1772_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Isognomon ephippium",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:208462",
"accession": "AB594382.1.1731_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Isognomon ephippium",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:208462",
"accession": "HQ329335.1.1773_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
17.0
|
| id |
6f4ee418-959b-4a7d-8dd8-2da00f03a8d0
|
| scientificName |
Isognomon
|
| eventDate |
2023-11-28
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| materialSampleID |
USP-24-01-67
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTTGCGGTCCGCTCCTTGGCGGTCACTGCTCGATCCTGACCTACCTCACCGGTTTTTGCCCTTGGTGCTCTTGACTGAGTGTCTCGGGTGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Isognomon",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:138091",
"confidence": 0.99
},
{
"method": "VSEARCH",
"scientificName": "Isognomon spathulata",
"accession": "HQ329348.1.1772_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Isognomon perna",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:208470",
"accession": "AB594388.1.1728_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Isognomon bicolor",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420737",
"accession": "HQ329332.1.1772_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Isognomon ephippium",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:208462",
"accession": "AB594382.1.1731_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Isognomon ephippium",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:208462",
"accession": "HQ329335.1.1773_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
8.0
|
| id |
9ffd4af6-9a15-4858-b5a6-3a5449eea29f
|
| scientificName |
Isognomon
|
| eventDate |
2023-11-28
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| materialSampleID |
USP-24-01-76
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTCCAGGCTTGCGGTCCGCTCCTTGGCGGTCACTGCTCGATCCTGACCTACCTCACCGGTTTTTGCCCTTGGTGCTCTTGACTGAGTGTCTCGGGTGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Isognomon",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:138091",
"confidence": 0.99
},
{
"method": "VSEARCH",
"scientificName": "Isognomon spathulata",
"accession": "HQ329348.1.1772_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Isognomon perna",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:208470",
"accession": "AB594388.1.1728_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Isognomon bicolor",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:420737",
"accession": "HQ329332.1.1772_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Isognomon ephippium",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:208462",
"accession": "AB594382.1.1731_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Isognomon ephippium",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:208462",
"accession": "HQ329335.1.1773_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
1.0
|
|