PacMAN decision support system

Potential detection of Pseudopolydora achaeta in Fiji

Description:

Potential detection of Pseudopolydora achaeta with confidence low on 2023-11-28 in material sample USP-24-01-170, marker COI

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Pseudopolydora achaeta
Annelida > Polychaeta > Spionida > Spionidae
WoRMS: 331410

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

Reads:

11.0

Names:

Occurrences:

view occurrences

id	cb20f067-c0b9-479f-a4a9-57d5c4e5552f
scientificName	Pseudopolydora achaeta
AphiaID	331410
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20231128_S2B
materialSampleID	USP-24-01-170
target_gene	COI
DNA_sequence	TTTATCTGGCAACGTTGCACACGCTGGACCTGCAGTTGATCTCACTATTCTATCCCTTCACCTTGCAGGTGTTTCCTCGCTCTTAGGGGCTATTAACTTTACAACAACTATTATAAATAGACGGATAGAAGGAATACCTTCTGAAAAAATACCATTATTTATTTGGTCCGTATTAGTAACAGTTGGACTACTAATTCTCGCACTACCTGTTCTGGCGGGAGCACTAACAATGCTCATTTTAGATCGTAATTGCAATACTACATTCTTTGAGCCGACTGGCGGAGGAGATCCAATTTTATTCCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "accession": "MW830148", "identity": 0.974, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "accession": "MW830149", "identity": 0.974, "query_cover": 0.9968 } ] }
organismQuantity	11.0

id	256a4aec-f988-41b4-9240-0d74d91f49c5
scientificName	Pseudopolydora achaeta
AphiaID	331410
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20231128_S3A
materialSampleID	USP-24-01-172
target_gene	COI
DNA_sequence	TTTATCTGGCAACGTTGCACACGCTGGACCTGCAGTTGATCTCACTATTCTATCCCTTCACCTTGCAGGTGTTTCCTCGCTCTTAGGGGCTATTAACTTTACAACAACCATTATAAATAGACGGATAGAAGGAATACCTTCTGAAAAAATACCATTATTTATTTGGTCCGTATTAGTAACAGTTGGACTACTAATTCTCGCACTACCTGTTCTGGCGGGAGCACTAACAATGCTCATTTTAGATCGTAATTGCAATACTACATTCTTTGAGCCGACTGGCGGAGGAGATCCAATTTTATTCCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "accession": "MW830148", "identity": 0.971, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "accession": "MW830149", "identity": 0.971, "query_cover": 0.9968 } ] }
organismQuantity	10.0

id	e98e4611-3910-4af7-9aa8-66faccdfd758
scientificName	Pseudopolydora achaeta
AphiaID	331410
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20231128_S2B
materialSampleID	USP-24-01-170
target_gene	COI
DNA_sequence	TTTATCTGGCAACGTTGCACACGCTGGACCTGCAGTTGATCTCACTATTCTATCCCTTCACCTTGCAGGTGTTTCCTCGCTCTTAGGGGCTATTAACTTTACAACAACCATTATAAATAGACGGATAGAAGGAATACCTTCTGAAAAAATACCATTATTTATTTGGTCCGTATTAGTAACAGTTGGACTACTAATTCTCGCACTACCTGTTCTGGCGGGAGCACTAACAATGCTCATTTTAGATCGTAATTGCAATACTACATTCTTTGAGCCGACTGGCGGAGGAGATCCAATTTTATTCCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "accession": "MW830148", "identity": 0.971, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "accession": "MW830149", "identity": 0.971, "query_cover": 0.9968 } ] }
organismQuantity	10.0

id	ec1a33a2-6f9f-4d66-bfb1-bcbf4dd240c0
scientificName	Pseudopolydora achaeta
AphiaID	331410
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20231128_WC
materialSampleID	USP-24-01-165
target_gene	COI
DNA_sequence	TTTATCTGGCAACGTTGCACACGCTGGACCTGCAGTTGATCTCACTATTCTATCCCTTCACCTTGCAGGTGTTTCCTCGCTCTTAGGGGCTATTAACTTTACAACAACCATTATAAATAGACGGATAGAAGGAATACCTTCTGAAAAAATACCATTATTTATTTGGTCCGTATTAGTAACAGTTGGACTACTAATTCTCGCACTACCTGTTCTGGCGGGAGCACTAACAATGCTCATTTTAGATCGTAATTGCAATACTACATTCTTTGAGCCGACTGGCGGAGGAGATCCAATTTTATTCCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "accession": "MW830148", "identity": 0.971, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "accession": "MW830149", "identity": 0.971, "query_cover": 0.9968 } ] }
organismQuantity	3.0

id	1ab6e262-e969-4126-89d6-8146d872d0b2
scientificName	Pseudopolydora achaeta
AphiaID	331410
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20231128_S3A
materialSampleID	USP-24-01-172
target_gene	COI
DNA_sequence	TTTATCTGGCAACGTTGCACACGCTGGACCTGCAGTTGATCTCACTATTCTATCCCTTCACCTTGCAGGTGTTTCCTCGCTCTTAGGGGCTATTAACTTTACAACAACTATTATAAATAGACGGATAGAAGGAATACCTTCTGAAAAAATACCATTATTTATTTGGTCCGTATTAGTAACAGTTGGACTACTAATTCTCGCACTACCTGTTCTGGCGGGAGCACTAACAATGCTCATTTTAGATCGTAATTGCAATACTACATTCTTTGAGCCGACTGGCGGAGGAGATCCAATTTTATTCCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "accession": "MW830148", "identity": 0.974, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "accession": "MW830149", "identity": 0.974, "query_cover": 0.9968 } ] }
organismQuantity	1.0

Pseudopolydora achaeta does not have an offial status in Fiji.

No notes found.