PacMAN decision support system

Potential detection of Diplosoma simile in Fiji

Description:

Potential detection of Diplosoma simile with confidence low on 2023-04-27 in material sample USP-24-01-02, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Diplosoma simile
Chordata > Ascidiacea > Aplousobranchia > Didemnidae
WoRMS: 250415

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

283.0

Names:

5

Occurrences:

view occurrences

id	976e27a9-8327-4aa8-b088-6b61a786df52
scientificName	Diplosoma
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-02
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	283.0

id	c52b8f56-f7b2-4898-93bb-a0ccb703cd1f
scientificName	Diplosoma
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-11
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	247.0

id	e1e0f4be-45a5-4262-a337-9cc5deabf244
scientificName	Diplosoma
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-08
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	177.0

id	1b2e0e8c-d628-41a9-b00c-a3312a6961e8
scientificName	Diplosoma
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-07
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	12.0

id	fac89599-c729-498c-8dc1-4475717c063f
scientificName	Diplosoma
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-10
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	7.0

id	8601e908-4ede-46be-afac-650991bf6c81
scientificName	Diplosoma
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-05
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	2.0

id	3c553ad2-04f5-481e-8760-da1702012551
scientificName	Diplosoma
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-01
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	1.0

Diplosoma simile in Fiji

Status

Diplosoma simile does not have an offial status in Fiji.

Notes

No notes found.