| Occurrences: |
view occurrences
| id |
a53dcb80-bc02-4bf7-b0d9-d05dc9166ea3
|
| scientificName |
Ascidia sydneiensis var. samea
|
| AphiaID |
215940
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S16
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.89
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.976,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
60.0
|
| id |
c93caa1f-3d47-46cd-9bfb-db853e0c83d7
|
| scientificName |
Ascidia sydneiensis var. samea
|
| AphiaID |
215940
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S7
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.89
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.976,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
44.0
|
| id |
e1726159-f322-4890-94b9-b7f3ad7fc1ad
|
| scientificName |
Ascidia sydneiensis var. samea
|
| AphiaID |
215940
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
S13
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.89
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.976,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
36.0
|
| id |
4c358a63-8178-4306-8f04-b3a32a1a26b6
|
| scientificName |
Ascidia sydneiensis var. samea
|
| AphiaID |
215940
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S20
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.89
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.976,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
25.0
|
| id |
4920fcb6-e1df-4bd4-b0e0-4c7d5834c5cb
|
| scientificName |
Ascidia sydneiensis var. samea
|
| AphiaID |
215940
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S42
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.89
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.976,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
22.0
|
| id |
e5268b4b-38f8-4065-9ddb-9f475f64273b
|
| scientificName |
Ascidia sydneiensis var. samea
|
| AphiaID |
215940
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S16
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTACTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.87
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
22.0
|
| id |
9b914d75-0b45-4b8d-aa1b-04bc534aeb54
|
| scientificName |
Ascidia sydneiensis var. samea
|
| AphiaID |
215940
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
S18
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.89
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.976,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
20.0
|
| id |
8dc82d61-a12a-43a7-b1a3-62b603f6e093
|
| scientificName |
Ascidia sydneiensis var. samea
|
| AphiaID |
215940
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S19
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.89
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.976,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
12.0
|
| id |
1c2f0b37-666e-4daf-b726-1ca0ceff377d
|
| scientificName |
Ascidia sydneiensis var. samea
|
| AphiaID |
215940
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S15
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.89
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.976,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
11.0
|
| id |
88086d71-14b2-400b-a274-bb813ba62c7c
|
| scientificName |
Ascidia sydneiensis var. samea
|
| AphiaID |
215940
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S20
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTACTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.87
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
4.0
|
| id |
cb5c36fa-c499-40cc-9cee-e2ec51acae24
|
| scientificName |
Ascidia sydneiensis var. samea
|
| AphiaID |
215940
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
S17
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.89
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.976,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
4.0
|
| id |
65df9305-3781-4feb-8f80-ef78f952b3c3
|
| scientificName |
Ascidia sydneiensis var. samea
|
| AphiaID |
215940
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S42
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTACTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.87
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
3.0
|
| id |
a23ad818-55d2-4c55-9e74-3a194675b0fe
|
| scientificName |
Ascidia sydneiensis var. samea
|
| AphiaID |
215940
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S42
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAAAAGTGTATATTTAGTCTGGTGCCAGCAGCCGCGGAAACTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGA
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.85
}
]
}
|
| organismQuantity |
3.0
|
| id |
c71af480-2922-4d50-95ca-b43074006dd3
|
| scientificName |
Ascidia sydneiensis var. samea
|
| AphiaID |
215940
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S19
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTACTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.87
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
3.0
|
| id |
1e32f1cc-aea5-4746-b7bc-e01168bb921f
|
| scientificName |
Ascidia sydneiensis var. samea
|
| AphiaID |
215940
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S5
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.89
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.976,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
2.0
|
| id |
be8f4d0e-4a79-4d51-9f38-260e0bd1e95f
|
| scientificName |
Ascidia sydneiensis var. samea
|
| AphiaID |
215940
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S39
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.89
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.976,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
1.0
|
|