PacMAN decision support system

Potential detection of Polyclinum constellatum in Fiji

Description:

Potential detection of Polyclinum constellatum with confidence medium on 2022-10-03 in material sample S171, marker COI

Confidence:

medium

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Polyclinum constellatum
Chordata > Ascidiacea > Aplousobranchia > Polyclinidae
WoRMS: 215891

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

246.0

Names:

Occurrences:

view occurrences

id	f2401d63-77ae-4099-aab3-e4ebd1a340f6
scientificName	Polyclinum constellatum
AphiaID	215891
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S171
target_gene	COI
DNA_sequence	CCTTTCTTCTGTATTATCCCATTCCTCTCCGGCGGTGGATATGAGAATTTTTTCTTTACATCTCGCTAGGGTTTCTTCTATTCTTAGGTCTATAAATTTCTTAGTTACATTAAGGAATATAAAGCATAAGGGAATATCTTTTTCTTCTTATCCTTTATTTGTTTGGTCTATTATTGTAACTACAATCCTTCTTATTCTCTCTCTTCCTGTATTAGCTGCGGCAATTACAATACTTCTCTTTGATCGTAATCTTAATACTAGTTTTTTTGACCCAGCTGGAGGAAGAGATCCAATTCTTTTTCAGCATCTTTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "accession": "MT637964", "identity": 1, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "accession": "MW285146", "identity": 1, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "accession": "OL597608", "identity": 1, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "accession": "MW858363", "identity": 0.997, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "accession": "MW858364", "identity": 0.997, "query_cover": 0.9968 } ] }
organismQuantity	246.0

id	29f63a43-0693-4d6a-a5e2-1ba57c880c57
scientificName	Polyclinum constellatum
AphiaID	215891
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S177
target_gene	COI
DNA_sequence	CCTTTCTTCTGTATTATCCCATTCCTCTCCGGCGGTGGATATGAGAATTTTTTCTTTACATCTCGCTAGGGTTTCTTCTATTCTTAGGTCTATAAATTTCTTAGTTACATTAAGGAATATAAAGCATAAGGGAATATCTTTTTCTTCTTATCCTTTATTTGTTTGGTCTATTATTGTAACTACAATCCTTCTTATTCTCTCTCTTCCTGTATTAGCTGCGGCAATTACAATACTTCTCTTTGATCGTAATCTTAATACTAGTTTTTTTGACCCAGCTGGAGGAAGAGATCCAATTCTTTTTCAGCATCTTTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "accession": "MT637964", "identity": 1, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "accession": "MW285146", "identity": 1, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "accession": "OL597608", "identity": 1, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "accession": "MW858363", "identity": 0.997, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "accession": "MW858364", "identity": 0.997, "query_cover": 0.9968 } ] }
organismQuantity	26.0

id	1c95dd17-e7d4-4ad4-9385-04c72c2b40f8
scientificName	Polyclinum constellatum
AphiaID	215891
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S164
target_gene	COI
DNA_sequence	CCTTTCTTCTGTATTATCCCATTCCTCTCCGGCGGTGGATATGAGAATTTTTTCTTTACATCTCGCTAGGGTTTCTTCTATTCTTAGGTCTATAAATTTCTTAGTTACATTAAGGAATATAAAGCATAAGGGAATATCTTTTTCTTCTTATCCTTTATTTGTTTGGTCTATTATTGTAACTACAATCCTTCTTATTCTCTCTCTTCCTGTATTAGCTGCGGCAATTACAATACTTCTCTTTGATCGTAATCTTAATACTAGTTTTTTTGACCCAGCTGGAGGAAGAGATCCAATTCTTTTTCAGCATCTTTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "accession": "MT637964", "identity": 1, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "accession": "MW285146", "identity": 1, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "accession": "OL597608", "identity": 1, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "accession": "MW858363", "identity": 0.997, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "accession": "MW858364", "identity": 0.997, "query_cover": 0.9968 } ] }
organismQuantity	7.0

id	c7100e27-680a-4732-a929-67e015e0d9e2
scientificName	Polyclinum constellatum
AphiaID	215891
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S171
target_gene	COI
DNA_sequence	CCTTTCTTCTGTATTATCCCATTCCTCTCCGGCGGTGGATATGAGAATTTTTTCTTTACATCTCGCTAGGGTTTCTTCTATTCTTAGGTCTATAAATTTCTTAGTTACATTAAGGAATATAAAGCATAAGGGAATATCTTTTTCTTCTTATCCTTTATTTGTTTGGTCTATTATTGTAACTACAATCCTTCTTATTCTCTCTCTTCCTGTATTAGCTGCGGCAATTACAATACTTCTCTTTGATCGTAATCTTAATACTAGTTTTTTTGACCCAGCTGGAGGAAGAGATCCGATTCTTTTTCAGCATCTTTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "accession": "MT637964", "identity": 1, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "accession": "MW285146", "identity": 1, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "accession": "MT873559", "identity": 0.997, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "accession": "OL597608", "identity": 0.997, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "accession": "OM912799", "identity": 0.997, "query_cover": 0.9968 } ] }
organismQuantity	2.0

id	5f155856-4506-4eea-855a-c64f2fab7122
scientificName	Polyclinum constellatum
AphiaID	215891
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S177
target_gene	COI
DNA_sequence	CCTTTCTTCTGTATTATCCCATTCCTCTCCGGCGGTGGATATGAGAATTTTTTCTTTACATCTCGCTAGGGTTTCTTCTATTCTTAGGTCTATAAATTTCTTAGTTACATTAAGGAATATAAAGCATAAGGGAATATCTTTTTCTTCTTATCCTTTATTTGTTTGGTCTATTATTGTAACTACAATCCTTCTTATTCTCTCTCTTCCTGTATTAGCTGCGGCAATTACAATACTTCTCTTTGATCGTAATCTTAATACTAGTTTTTTTGACCCAGCTGGAGGAAGAGATCCGATTCTTTTTCAGCATCTTTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "accession": "MT637964", "identity": 1, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "accession": "MW285146", "identity": 1, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "accession": "MT873559", "identity": 0.997, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "accession": "OL597608", "identity": 0.997, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Polyclinum constellatum", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215891", "accession": "OM912799", "identity": 0.997, "query_cover": 0.9968 } ] }
organismQuantity	1.0

Polyclinum constellatum in Fiji

Status

Polyclinum constellatum does not have an offial status in Fiji.

Notes

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