PacMAN decision support system

Potential detection of Clava multicornis in Fiji

Description:

Potential detection of Clava multicornis with confidence medium on 2022-02-16 in material sample S21, marker 18S

Confidence:

medium

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Clava multicornis
Cnidaria > Hydrozoa > Anthoathecata > Hydractiniidae
WoRMS: 117426

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

9150.0

Names:

Occurrences:

view occurrences

id	83522de8-ec15-404e-a381-e67f8e27b312
scientificName	Apolemia
eventDate	2022-02-16
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S21
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAGGACCGAAGTAATGATTAAGAGGGACAATTGGGGGCATCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apolemia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clava_multicornis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117426", "accession": "JQ407367.1.1618_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867466.1.870_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "KC583172.1.1095_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "JQ955782.1.960_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867240.1.879_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	9150.0

id	20ba8e80-4786-4b78-b1e1-6dd4c4f3f29d
scientificName	Apolemia
eventDate	2022-02-16
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S43
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAGGACCGAAGTAATGATTAAGAGGGACAATTGGGGGCATCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apolemia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clava_multicornis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117426", "accession": "JQ407367.1.1618_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867466.1.870_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "KC583172.1.1095_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "JQ955782.1.960_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867240.1.879_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	2246.0

id	e3f9e09f-e965-41db-971e-3b97ce87d5bf
scientificName	Apolemia
eventDate	2022-02-16
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S9
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAGGACCGAAGTAATGATTAAGAGGGACAATTGGGGGCATCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apolemia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clava_multicornis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117426", "accession": "JQ407367.1.1618_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867466.1.870_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "KC583172.1.1095_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "JQ955782.1.960_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867240.1.879_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	949.0

id	afea7445-0e47-416d-8454-9857b7f82a72
scientificName	Apolemia
eventDate	2022-02-16
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S22
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAGGACCGAAGTAATGATTAAGAGGGACAATTGGGGGCATCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apolemia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clava_multicornis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117426", "accession": "JQ407367.1.1618_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867466.1.870_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "KC583172.1.1095_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "JQ955782.1.960_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867240.1.879_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	159.0

id	1d6247c8-3e28-48e5-ab9c-19ef2bb4d02f
scientificName	Apolemia
eventDate	2022-02-16
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S8
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAGGACCGAAGTAATGATTAAGAGGGACAATTGGGGGCATCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apolemia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clava_multicornis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117426", "accession": "JQ407367.1.1618_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867466.1.870_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "KC583172.1.1095_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "JQ955782.1.960_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867240.1.879_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	36.0

id	fc6bcf4f-fde7-4195-9f0d-ab2722cc9af0
scientificName	Apolemia
eventDate	2022-02-16
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S12
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAGGACCGAAGTAATGATTAAGAGGGACAATTGGGGGCATCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apolemia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clava_multicornis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117426", "accession": "JQ407367.1.1618_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867466.1.870_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "KC583172.1.1095_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "JQ955782.1.960_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867240.1.879_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	3.0

id	ac0169a6-e2f5-4b63-a199-abb6022be003
scientificName	Apolemia
eventDate	2022-02-16
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S23
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAGGACCGAAGTAATGATTAAGAGGGACAATTGGGGGCATCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apolemia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clava_multicornis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117426", "accession": "JQ407367.1.1618_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867466.1.870_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "KC583172.1.1095_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "JQ955782.1.960_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867240.1.879_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	2.0

Clava multicornis in Fiji

Status

Clava multicornis does not have an offial status in Fiji.

Notes

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