PacMAN decision support system

Potential detection of Turritopsis dohrnii in Fiji

Description:

Potential detection of Turritopsis dohrnii with confidence medium on 2022-11-23 in material sample S166, marker COI

Confidence:

medium

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Turritopsis dohrnii
Cnidaria > Hydrozoa > Anthoathecata > Oceaniidae
WoRMS: 151801

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

13.0

Names:

Occurrences:

view occurrences

id	bb281e85-0339-4d39-be6c-8c4d62aa1bd6
scientificName	Turritopsis dohrnii
AphiaID	151801
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S166
target_gene	COI
DNA_sequence	ATTAGCTGGGCCACAAGCACATTCTGGAGGTTCTGTCGATATGGCTATATTTAGTTTACATTGTGCAGGTGCCTCATCAATAATGGGTGCTATAAACTTTATAACCACTATTTTTAATATGAGAGCCCCAGGTATGACCTTTGATAAATTACCTTTGTTTGTATGGTCAGTATTAATAACAGCTTTTCTTTTGTTATTATCTCTACCTGTATTGGCAGGTGCTATAACCATGCTATTAACAGATAGGAATTTCAATACTACTTTTTTTGACCCAGCAGGAGGGGGAGATCCTATACTTTACCAACACTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Turritopsis dohrnii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:151801", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Turritopsis dohrnii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:151801", "accession": "KX096596", "identity": 1, "query_cover": 0.9968 } ] }
organismQuantity	13.0

id	1d93bca7-c0ce-4998-9e3e-6da482e47c61
scientificName	Turritopsis dohrnii
AphiaID	151801
eventDate	2022-11-23
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S174
target_gene	COI
DNA_sequence	ATTAGCTGGGCCACAAGCACATTCTGGAGGTTCTGTCGATATGGCTATATTTAGTTTACATTGTGCAGGTGCCTCATCAATAATGGGTGCTATAAACTTCATAACCACTATTTTTAATATGAGAGCCCCAGGTATGACTTTTGATAAATTACCTTTGTTTGTGTGGTCAGTATTAATAACAGCTTTTCTTTTGTTATTATCTCTACCTGTATTGGCAGGTGCTATAACCATGCTATTAACAGATAGGAATTTCAATACTACTTTTTTTGACCCAGCAGGAGGGGGAGATCCTATACTTTACCAACACTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Turritopsis dohrnii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:151801", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Turritopsis dohrnii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:151801", "accession": "KX096596", "identity": 0.99, "query_cover": 0.9968 } ] }
organismQuantity	12.0

id	5de8ae63-e631-4fa2-a554-e9038964a508
scientificName	Turritopsis dohrnii
AphiaID	151801
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S166
target_gene	COI
DNA_sequence	ATTAGCTGGGCCACAAGCACATTCTGGAGGTTCTGTCGATATGGCTATATTTAGTTTACATTGTGCAGGTGCCTCATCAATAATGGGTGCTATAAACTTCATAACCACTATTTTTAATATGAGAGCCCCAGGTATGACTTTTGATAAATTACCTTTGTTTGTGTGGTCAGTATTAATAACAGCTTTTCTTTTGTTATTATCTCTACCTGTATTGGCAGGTGCTATAACCATGCTATTAACAGATAGGAATTTCAATACTACTTTTTTTGACCCAGCAGGAGGGGGAGATCCTATACTTTACCAACACTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Turritopsis dohrnii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:151801", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Turritopsis dohrnii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:151801", "accession": "KX096596", "identity": 0.99, "query_cover": 0.9968 } ] }
organismQuantity	1.0

id	b1ea9877-283b-432c-94e2-dd09c6738652
scientificName	Turritopsis dohrnii
AphiaID	151801
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S173
target_gene	COI
DNA_sequence	ATTAGCTGGGCCACAAGCACATTCTGGAGGTTCTGTCGATATGGCTATATTTAGTTTACATTGTGCAGGTGCCTCATCAATAATGGGTGCTATAAACTTTATAACTACTATTTTTAATATGAGAGCCCCAGGTATGACTTTTGATAAATTACCTTTGTTTGTGTGGTCAGTATTAATAACAGCTTTTCTTTTGTTATTATCTCTACCTGTATTGGCAGGTGCTATAACCATGCTATTAACAGATAGGAATTTCAATACTACTTTTTTTGATCCAGCAGGAGGGGGAGACCCTATACTTTACCAACACTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Turritopsis dohrnii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:151801", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Turritopsis dohrnii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:151801", "accession": "KX096596", "identity": 0.984, "query_cover": 0.9968 } ] }
organismQuantity	64.0

id	57c88d11-026c-47cc-882d-4dd331889daf
scientificName	Turritopsis dohrnii
AphiaID	151801
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S166
target_gene	COI
DNA_sequence	ATTAGCTGGGCCACAAGCACATTCTGGAGGTTCTGTCGATATGGCTATATTTAGTTTACATTGTGCAGGTGCCTCATCAATAATGGGTGCTATAAACTTTATAACTACTATTTTTAATATGAGAGCCCCAGGTATGACTTTTGATAAATTACCTTTGTTTGTGTGGTCAGTATTAATAACAGCTTTTCTTTTGTTATTATCTCTACCTGTATTGGCAGGTGCTATAACCATGCTATTAACAGATAGGAATTTCAATACTACTTTTTTTGATCCAGCAGGAGGGGGAGACCCTATACTTTACCAACACTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Turritopsis dohrnii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:151801", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Turritopsis dohrnii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:151801", "accession": "KX096596", "identity": 0.984, "query_cover": 0.9968 } ] }
organismQuantity	20.0

Turritopsis dohrnii does not have an offial status in Fiji.

No notes found.