PacMAN decision support system

Potential detection of Dendostrea sandvichensis in Fiji

Description:

Potential detection of Dendostrea sandvichensis with confidence low on 2023-08-15 in material sample USP-24-01-152, marker COI

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Dendostrea sandvichensis
Mollusca > Bivalvia > Ostreida > Ostreidae
WoRMS: 506713

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

0.995

Reads:

1.0

Names:

Occurrences:

view occurrences

id	fecfcd6d-0587-403f-9c72-301955f79774
scientificName	Dendostrea sandvichensis
AphiaID	506713
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20230815_S2C
materialSampleID	USP-24-01-152
target_gene	COI
DNA_sequence	TTTATCTACTTTCTCATATCATGGAATGTGCATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "confidence": 0.99 }, { "method": "VSEARCH", "scientificName": "Dendostrea sandvichensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:506713", "accession": "MN608290", "identity": 0.995, "query_cover": 0.995 }, { "method": "VSEARCH", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "accession": "KC683510", "identity": 0.99, "query_cover": 0.995 }, { "method": "VSEARCH", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "accession": "KC683511", "identity": 0.99, "query_cover": 0.995 } ] }
organismQuantity	1.0

id	1dfa2b8a-a892-40e0-9742-4ce49f4d6464
scientificName	Dendostrea sandvichensis
AphiaID	506713
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20230815_S3C
materialSampleID	USP-24-01-155
target_gene	COI
DNA_sequence	TTTATCTACTTTCTCATATCATGGAATGTGTATGGACTTGGCTATTTTGAGGCTTCACTTAGCTGGTATTAGATCAATTTTTAGATCAATTAACTTCATGGTAACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACCTCATTTTTATTACTTACGACTCTTCCAGTATTGGCTGGTGGGCTGACTATGTTACTGACGGATCGACATTTTAATACTTCTTTCTTTGATCCGGTAGGGGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "confidence": 1 } ] }
organismQuantity	267.0

id	b6dbc56f-cb74-4466-b1f1-53509c72c807
scientificName	Dendostrea sandvichensis
AphiaID	506713
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20230815_S3B
materialSampleID	USP-24-01-154
target_gene	COI
DNA_sequence	TTTATCTACTTTCTCATACCATGGAATGTGTATGGACTTGGCTATTTTGAGGCTTCACTTAGCTGGTATTAGATCAATTTTTAGATCAATTAACTTCATGGTAACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACCTCATTTTTATTACTTACGACTCTTCCAGTATTGGCTGGTGGGCTGACTATGTTACTGACGGATCGACATTTTAATACTTCTTTCTTTGATCCGGTAGGGGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "confidence": 1 } ] }
organismQuantity	198.0

id	dee5e5ec-19ec-4721-a713-eb0abaee6915
scientificName	Dendostrea sandvichensis
AphiaID	506713
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20230815_S2C
materialSampleID	USP-24-01-152
target_gene	COI
DNA_sequence	TTTATCTACTTTCTCATATCATGGAATGTGTATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTCAGGTCAATTAACTTTATGGTGACAATTACTAACATACGATCAGTAGATGGCCATTTACTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTACTACTTACCACTCTTCCAGTGCTGGCTGGTGGGTTGACTATGTTGCTGACGGATCGACATTTCAATACTTCTTTCTTTGATCCGGTAGGAGGCGGTGATCCGGTCTTATTTCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "confidence": 1 } ] }
organismQuantity	124.0

id	f4ef2fc6-1a21-4ef6-81d9-2be34902ba71
scientificName	Dendostrea sandvichensis
AphiaID	506713
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20230815_S2C
materialSampleID	USP-24-01-152
target_gene	COI
DNA_sequence	TTTATCTACTTTCTCATATCATGGAATGTGTATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTCTTCGATCCGGTAGGAGGCGGTGATCCGGTCTTATTTCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "accession": "KC683510", "identity": 0.98, "query_cover": 0.9967 }, { "method": "VSEARCH", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "accession": "KC683511", "identity": 0.98, "query_cover": 0.9967 } ] }
organismQuantity	6.0

id	7667b7ac-afbf-422f-a977-5b28bc68505a
scientificName	Dendostrea sandvichensis
AphiaID	506713
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20230815_S3B
materialSampleID	USP-24-01-154
target_gene	COI
DNA_sequence	TGATCTATTAAAGTGACCTCATTTTTATTACTTACGACTCTTCCAGTATTGGCTGGTGGGCTGACTATGTTACTGACGGATCGACATTTTAATACTTCTTTCTTTGATCCGGTAGGGGGTGGTGATCCGGTCTTATTTCAGTATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "confidence": 0.87 } ] }
organismQuantity	2.0

id	c1ebf0e1-33df-4797-9845-231b4544fa52
scientificName	Dendostrea sandvichensis
AphiaID	506713
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20230815_S3C
materialSampleID	USP-24-01-155
target_gene	COI
DNA_sequence	TTTATCTACTTTCTCATACCATGGAATGTGTATGGACTTGGCTATTTTGAGGCTTCACTTAGCTGGTATTAGATCAATTTTTAGATCAATTAACTTCATGGTAACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACCTCATTTTTATTACTTACGACTCTTCCAGTATTGGCTGGTGGGCTGACTATGTTACTGACGGATCGACATTTTAATACTTCTTTCTTTGATCCGGTAGGGGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Dendostrea crenulifera", "scientificNameID": "urn:lsid:marinespecies.org:taxname:244714", "confidence": 1 } ] }
organismQuantity	1.0

Dendostrea sandvichensis does not have an offial status in Fiji.

No notes found.