PacMAN decision support system

Potential detection of Paramphiascella fulvofasciata in Fiji

Description:

Potential detection of Paramphiascella fulvofasciata with confidence medium on 2023-11-28 in material sample USP-24-01-76, marker 18S

Confidence:

medium

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Paramphiascella fulvofasciata
Arthropoda > Copepoda > Harpacticoida > Miraciidae
WoRMS: 115960

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

5966.0

Names:

2

Occurrences:

view occurrences

id	245c55d1-83fa-4193-8852-7bae5d46b9a7
scientificName	Paramphiascella fulvofasciata
AphiaID	115960
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-76
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCATATGTTAAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTCGGCGGGCCGGGGGCGGTTCGCTTTATGGCGTGACTGCCCCACTGGCCCGTGTTTTTGGCGGAGGTCGTCGGGTGCTCTTAATCGAGTGTCCTGCGGCGCCGTCAGGTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "confidence": 0.93 }, { "method": "VSEARCH", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "accession": "EU380293.1.1808_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Amphiascoides atopus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:348699", "accession": "KC815328.1.1808_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Sarsamphiascus kawamurai", "scientificNameID": "urn:lsid:marinespecies.org:taxname:549150", "accession": "MN541391.1.1767_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Sarsamphiascus hawaiiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:1435816", "accession": "MN496456.1.1692_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	5966.0

id	202cfb91-bd1f-4aaa-8608-acb3d1c3dc63
scientificName	Paramphiascella fulvofasciata
AphiaID	115960
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-77
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCATATGTTAAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTCGGCGGGCCGGGGGCGGTTCGCTTTATGGCGTGACTGCCCCACTGGCCCGTGTTTTTGGCGGAGGTCGTCGGGTGCTCTTAATCGAGTGTCCTGCGGCGCCGTCAGGTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "confidence": 0.93 }, { "method": "VSEARCH", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "accession": "EU380293.1.1808_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Amphiascoides atopus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:348699", "accession": "KC815328.1.1808_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Sarsamphiascus kawamurai", "scientificNameID": "urn:lsid:marinespecies.org:taxname:549150", "accession": "MN541391.1.1767_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Sarsamphiascus hawaiiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:1435816", "accession": "MN496456.1.1692_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	951.0

id	5d8a722b-e41a-4ef0-b30e-75ef77097772
scientificName	Paramphiascella fulvofasciata
AphiaID	115960
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-78
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCATATGTTAAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTCGGCGGGCCGGGGGCGGTTCGCTTTATGGCGTGACTGCCCCACTGGCCCGTGTTTTTGGCGGAGGTCGTCGGGTGCTCTTAATCGAGTGTCCTGCGGCGCCGTCAGGTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "confidence": 0.93 }, { "method": "VSEARCH", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "accession": "EU380293.1.1808_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Amphiascoides atopus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:348699", "accession": "KC815328.1.1808_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Sarsamphiascus kawamurai", "scientificNameID": "urn:lsid:marinespecies.org:taxname:549150", "accession": "MN541391.1.1767_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Sarsamphiascus hawaiiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:1435816", "accession": "MN496456.1.1692_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	70.0

id	bde1b857-8383-43fb-a18f-7fec0a3f35de
scientificName	Paramphiascella fulvofasciata
AphiaID	115960
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-74
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCATATGTTAAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTCGGCGGGCCGGGGGCGGTTCGCTTTATGGCGTGACTGCCCCACTGGCCCGTGTTTTTGGCGGAGGTCGTCGGGTGCTCTTAATCGAGTGTCCTGCGGCGCCGTCAGGTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "confidence": 0.93 }, { "method": "VSEARCH", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "accession": "EU380293.1.1808_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Amphiascoides atopus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:348699", "accession": "KC815328.1.1808_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Sarsamphiascus kawamurai", "scientificNameID": "urn:lsid:marinespecies.org:taxname:549150", "accession": "MN541391.1.1767_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Sarsamphiascus hawaiiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:1435816", "accession": "MN496456.1.1692_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	18.0

id	271aa122-348d-4908-a5b8-a86c5e367ffb
scientificName	Paramphiascella fulvofasciata
AphiaID	115960
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-73
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCATATGTTAAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTCGGCGGGCCGGGGGCGGTTCGCTTTATGGCGTGACTGCCCCACTGGCCCGTGTTTTTGGCGGAGGTCGTCGGGTGCTCTTAATCGAGTGTCCTGCGGCGCCGTCAGGTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "confidence": 0.93 }, { "method": "VSEARCH", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "accession": "EU380293.1.1808_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Amphiascoides atopus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:348699", "accession": "KC815328.1.1808_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Sarsamphiascus kawamurai", "scientificNameID": "urn:lsid:marinespecies.org:taxname:549150", "accession": "MN541391.1.1767_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Sarsamphiascus hawaiiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:1435816", "accession": "MN496456.1.1692_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	16.0

id	4e3e332a-86ff-4301-a0d0-00006c3a55ac
scientificName	Paramphiascella fulvofasciata
AphiaID	115960
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-88
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCATATGTTAAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTCGGCGGGCCGGGGGCGGTTCGCTTTATGGCGTGACTGCCCCACTGGCCCGTGTTTTTGGCGGAGGTCGTCGGGTGCTCTTAATCGAGTGTCCTGCGGCGCCGTCAGGTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "confidence": 0.93 }, { "method": "VSEARCH", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "accession": "EU380293.1.1808_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Amphiascoides atopus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:348699", "accession": "KC815328.1.1808_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Sarsamphiascus kawamurai", "scientificNameID": "urn:lsid:marinespecies.org:taxname:549150", "accession": "MN541391.1.1767_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Sarsamphiascus hawaiiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:1435816", "accession": "MN496456.1.1692_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	ea68b0a1-1221-4d6f-8a1e-d201dcdf535e
scientificName	Paramphiascella fulvofasciata
AphiaID	115960
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-75
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCATATGTTAAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTCGGCGGGCCGGGGGCGGTTCGCTTTATGGCGTGACTGCCCCACTGGCCCGTGTTTTTGGCGGAGGTCGTCGGGTGCTCTTAATCGAGTGTCCTGCGGCGCCGTCAGGTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "confidence": 0.93 }, { "method": "VSEARCH", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "accession": "EU380293.1.1808_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Amphiascoides atopus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:348699", "accession": "KC815328.1.1808_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Sarsamphiascus kawamurai", "scientificNameID": "urn:lsid:marinespecies.org:taxname:549150", "accession": "MN541391.1.1767_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Sarsamphiascus hawaiiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:1435816", "accession": "MN496456.1.1692_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	25ea4cff-55a6-40fd-a80e-6cca6ddd91e1
scientificName	Paramphiascella fulvofasciata
AphiaID	115960
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-76
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTCGGCGGGCCGGGGGCGGTTCGCTTTATGGCGTGACTGCCCCACTGGCCCGTGTTTTTGGCGGAGGTCGTCGGGTGCTCTTAATCGAGTGTCCTGCGGCGCCGTCAGGTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "confidence": 0.86 }, { "method": "VSEARCH", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "accession": "EU380293.1.1808_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Amphiascoides atopus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:348699", "accession": "KC815328.1.1808_U", "identity": 0.981, "query_cover": 0.9952 } ] }
organismQuantity	82.0

id	6e6e9ce4-6f91-4790-93a6-d8723bbde0a4
scientificName	Paramphiascella fulvofasciata
AphiaID	115960
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-77
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTCGGCGGGCCGGGGGCGGTTCGCTTTATGGCGTGACTGCCCCACTGGCCCGTGTTTTTGGCGGAGGTCGTCGGGTGCTCTTAATCGAGTGTCCTGCGGCGCCGTCAGGTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "confidence": 0.86 }, { "method": "VSEARCH", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "accession": "EU380293.1.1808_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Amphiascoides atopus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:348699", "accession": "KC815328.1.1808_U", "identity": 0.981, "query_cover": 0.9952 } ] }
organismQuantity	45.0

id	afdb6c79-210d-4f89-aa6d-cceff1315fb2
scientificName	Paramphiascella fulvofasciata
AphiaID	115960
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-74
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTCGGCGGGCCGGGGGCGGTTCGCTTTATGGCGTGACTGCCCCACTGGCCCGTGTTTTTGGCGGAGGTCGTCGGGTGCTCTTAATCGAGTGTCCTGCGGCGCCGTCAGGTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "confidence": 0.86 }, { "method": "VSEARCH", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "accession": "EU380293.1.1808_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Amphiascoides atopus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:348699", "accession": "KC815328.1.1808_U", "identity": 0.981, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	abdb8a7e-193a-4c4a-94a3-5bdb53dcf5af
scientificName	Paramphiascella fulvofasciata
AphiaID	115960
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-76
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCATATGTTAAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTCGGCGGGCCGGGGGCGGTTCGCTTTATGGCGTGACTGCCCCACTGGCCCGTGTTTTTGGCGGAGGTCGTCGGGTGCTCTTAATCGAGTGTCCTGCGGCGCCGTCAGGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "confidence": 0.88 }, { "method": "VSEARCH", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "accession": "EU380293.1.1808_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Amphiascoides atopus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:348699", "accession": "KC815328.1.1808_U", "identity": 0.976, "query_cover": 0.9952 } ] }
organismQuantity	202.0

id	d64b454a-fc82-4ef6-8221-09abcfbbb4a6
scientificName	Paramphiascella fulvofasciata
AphiaID	115960
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-76
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTCGGCGGGCCGGGGGCGGTTCGCTTTATGGCGTGACTGCCCCACTGGCCCGTGTTTTTGGCGGAGGTCGTCGGGTGCTCTTAATCGAGTGTCCTGCGGCGCCGTCAGGTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "confidence": 0.9 }, { "method": "VSEARCH", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "accession": "EU380293.1.1808_U", "identity": 0.976, "query_cover": 0.9952 } ] }
organismQuantity	168.0

id	bf444554-8793-4a44-a936-50ee90151a82
scientificName	Paramphiascella fulvofasciata
AphiaID	115960
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-77
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCATATGTTAAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTCGGCGGGCCGGGGGCGGTTCGCTTTATGGCGTGACTGCCCCACTGGCCCGTGTTTTTGGCGGAGGTCGTCGGGTGCTCTTAATCGAGTGTCCTGCGGCGCCGTCAGGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "confidence": 0.88 }, { "method": "VSEARCH", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "accession": "EU380293.1.1808_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Amphiascoides atopus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:348699", "accession": "KC815328.1.1808_U", "identity": 0.976, "query_cover": 0.9952 } ] }
organismQuantity	19.0

id	544317a3-f1f6-4dfc-acac-df65762b54b6
scientificName	Paramphiascella fulvofasciata
AphiaID	115960
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-73
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTCGGCGGGCCGGGGGCGGTTCGCTTTATGGCGTGACTGCCCCACTGGCCCGTGTTTTTGGCGGAGGTCGTCGGGTGCTCTTAATCGAGTGTCCTGCGGCGCCGTCAGGTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "confidence": 0.9 }, { "method": "VSEARCH", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "accession": "EU380293.1.1808_U", "identity": 0.976, "query_cover": 0.9952 } ] }
organismQuantity	2.0

id	1e7f0ea6-acea-4532-aed0-11b48b3db428
scientificName	Paramphiascella fulvofasciata
AphiaID	115960
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-77
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATCTCGGCGGGCCGGGGGCGGTTCGCTTTATGGCGTGACTGCCCCACTGGCCCGTGTTTTTGGCGGAGGTCGTCGGGTGCTCTTAATCGAGTGTCCTGCGGCGCCGTCAGGTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "confidence": 0.9 }, { "method": "VSEARCH", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "accession": "EU380293.1.1808_U", "identity": 0.976, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	6e1bf3a4-d636-456c-98bb-c7fa54d0397a
scientificName	Paramphiascella fulvofasciata
AphiaID	115960
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-74
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCATATGTTAAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTCGGCGGGCCGGGGGCGGTTCGCTTTATGGCGTGACTGCCCCACTGGCCCGTGTTTTTGGCGGAGGTCGTCGGGTGCTCTTAATCGAGTGTCCTGCGGCGCCGTCAGGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "confidence": 0.88 }, { "method": "VSEARCH", "scientificName": "Paramphiascella fulvofasciata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:115960", "accession": "EU380293.1.1808_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Amphiascoides atopus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:348699", "accession": "KC815328.1.1808_U", "identity": 0.976, "query_cover": 0.9952 } ] }
organismQuantity	1.0

Paramphiascella fulvofasciata in Fiji

Status

Paramphiascella fulvofasciata does not have an offial status in Fiji.

Notes

No notes found.