PacMAN decision support system

Potential detection of Botryllus schlosseri in Fiji

Description:

Potential detection of Botryllus schlosseri with confidence low on 2023-04-27 in material sample USP-24-01-11, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Botryllus schlosseri
Chordata > Ascidiacea > Stolidobranchia > Styelidae
WoRMS: 103862

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

53.0

Names:

Occurrences:

view occurrences

id	fb19a998-b7dc-46d0-9cf4-dcad4f2c1be4
scientificName	Botryllus
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-11
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATATTGGGCGAGCGCGGTCGGTCCGTCGCAGGGCGTGTACTGGTCGCGTTCGTCTCGAGCTTCGGTTCTCCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Botryllus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103529", "confidence": 0.9 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "FM244858.1.1786_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.981, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.981, "query_cover": 0.9952 } ] }
organismQuantity	53.0

id	aebdcc6b-5dc0-4254-ac42-5529dbc97180
scientificName	Botryllus
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-13
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATATTGGGCGAGCGCGGTCGGTCCGTCGCAGGGCGTGTACTGGTCGCGTTCGTCTCGAGCTTCGGTTCTCCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Botryllus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103529", "confidence": 0.9 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "FM244858.1.1786_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.981, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.981, "query_cover": 0.9952 } ] }
organismQuantity	27.0

id	8306e618-55ba-46dc-ae90-e5c09631c309
scientificName	Botryllus
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-12
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATATTGGGCGAGCGCGGTCGGTCCGTCGCAGGGCGTGTACTGGTCGCGTTCGTCTCGAGCTTCGGTTCTCCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Botryllus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103529", "confidence": 0.9 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "FM244858.1.1786_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.981, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.981, "query_cover": 0.9952 } ] }
organismQuantity	8.0

id	1eee3b92-783b-45a7-af85-902baae4c0ad
scientificName	Botryllus
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-18
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATATTGGGCGAGCGCGGTCGGTCCGTCGCAGGGCGTGTACTGGTCGCGTTCGTCTCGAGCTTCGGTTCTCCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Botryllus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103529", "confidence": 0.9 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "FM244858.1.1786_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.981, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.981, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	e7bf15ad-7b6f-4af3-8a0c-37fdea5fcc59
scientificName	Botryllus
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-07
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATGCTAAAGTTGTTGCGGTTGAAAAGCTCGTAGTTGGATATTGGGCGAGCGCGGTCGGTCCGTCGCAGGGCGTGTACTGGTCGCGTTCGTCTCGAGCTTCGGTTCTCCGTCGGTGCTCTTGACTGAGTGTCGGCGGTGGCCGAGAAGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Botryllus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103529", "confidence": 0.9 }, { "method": "VSEARCH", "scientificName": "Botryllus_schlosseri", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103862", "accession": "FM244858.1.1786_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botryllus_planus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:215992", "accession": "DQ346653.1.1798_U", "identity": 0.981, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Botrylloides_violacea", "accession": "AY903927.1.1803_U", "identity": 0.981, "query_cover": 0.9952 } ] }
organismQuantity	1.0

Botryllus schlosseri does not have an offial status in Fiji.

No notes found.