PacMAN decision support system

Potential detection of Chaetoceros decipiens in Fiji

Description:

Potential detection of Chaetoceros decipiens with confidence low on 2022-10-03 in material sample S77, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Chaetoceros decipiens
Heterokontophyta > Bacillariophyceae > Chaetocerotanae incertae sedis > Chaetocerotaceae
WoRMS: 149126

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

14.0

Names:

Occurrences:

view occurrences

id	d537cbfe-39e8-4670-ac16-884743c33c1e
scientificName	Chaetoceros
eventDate	2022-10-03
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S77
target_gene	18S
DNA_sequence	TTTGTTGGTTTGCGCACCGTGGTAATGATGAATAGGGACAGTTGTGGGTATTCGTATTCACTTGTAAGAGGTGAAATTCTTAGATTAAGGGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTCATTAATCAAGAACGAAAGTGTGGGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Chaetoceros", "scientificNameID": "urn:lsid:marinespecies.org:taxname:148985", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "accession": "DQ455710.1.1310_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros mitra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:148986", "accession": "KX611427.1.1596_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611428.1.1564_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611429.1.1461_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611430.1.1512_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	14.0

id	235832a7-dc66-4909-a952-6b55dee842f4
scientificName	Chaetoceros
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S74
target_gene	18S
DNA_sequence	TTTGTTGGTTTGCGCACCGTGGTAATGATGAATAGGGACAGTTGTGGGTATTCGTATTCACTTGTAAGAGGTGAAATTCTTAGATTAAGGGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTCATTAATCAAGAACGAAAGTGTGGGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Chaetoceros", "scientificNameID": "urn:lsid:marinespecies.org:taxname:148985", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "accession": "DQ455710.1.1310_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros mitra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:148986", "accession": "KX611427.1.1596_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611428.1.1564_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611429.1.1461_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611430.1.1512_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	4.0

id	4ddb59c9-ee94-4c2b-92dc-b40f7af4e565
scientificName	Chaetoceros
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S78
target_gene	18S
DNA_sequence	TTTGTTGGTTTGCGCACCGTGGTAATGATGAATAGGGACAGTTGTGGGTATTCGTATTCACTTGTAAGAGGTGAAATTCTTAGATTAAGGGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTCATTAATCAAGAACGAAAGTGTGGGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Chaetoceros", "scientificNameID": "urn:lsid:marinespecies.org:taxname:148985", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "accession": "DQ455710.1.1310_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros mitra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:148986", "accession": "KX611427.1.1596_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611428.1.1564_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611429.1.1461_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611430.1.1512_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	2.0

id	a41643ce-8eae-426d-b9a6-e7588e71061f
scientificName	Chaetoceros
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S81
target_gene	18S
DNA_sequence	TTTGTTGGTTTGCGCACCGTGGTAATGATGAATAGGGACAGTTGTGGGTATTCGTATTCACTTGTAAGAGGTGAAATTCTTAGATTAAGGGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTCATTAATCAAGAACGAAAGTGTGGGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Chaetoceros", "scientificNameID": "urn:lsid:marinespecies.org:taxname:148985", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "accession": "DQ455710.1.1310_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros mitra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:148986", "accession": "KX611427.1.1596_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611428.1.1564_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611429.1.1461_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611430.1.1512_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	1.0

id	7b3a2cc5-df72-4b39-83be-a1161048947f
scientificName	Chaetoceros decipiens
AphiaID	149126
eventDate	2022-10-03
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S77
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTTAGTTGTTGCAGTTAAAAAGCTCGTAGTTGAATTTCTGGTGGGAGAATGCAGTCCAACCTTAGGGTTGGTACTCGCACTCTCCGGCCATCCTTGGGTGGAGCCTGTCTGGCATTAAGTTGTCGGGCAGGGGATACCCATCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "accession": "DQ455710.1.1310_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	2.0

id	1f32aebd-6424-4bb1-b1ae-53bd0090a721
scientificName	Chaetoceros decipiens
AphiaID	149126
eventDate	2022-10-03
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S77
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTTAGTTGTTGCAGTTAAAAAGCTCGTAGTTGAATTTCTGGTGGGAGAATGCAGTCCAACCTCATGGTTGGTACTCGCACTCTCCGGCCATCCTTGGGTGGAGCCTGTCTGGCATTAAGTTGTCGGGCAGGGGATACCCATCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "confidence": 0.8 }, { "method": "VSEARCH", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "accession": "DQ455710.1.1310_U", "identity": 0.986, "query_cover": 0.9952 } ] }
organismQuantity	12.0

id	97dd9243-b4f6-41e2-84f6-ebf44beb4ad9
scientificName	Chaetoceros decipiens
AphiaID	149126
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S74
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTTAGTTGTTGCAGTTAAAAAGCTCGTAGTTGAATTTCTGGTGGGAGAATGCAGTCCAACCTCATGGTTGGTACTCGCACTCTCCGGCCATCCTTGGGTGGAGCCTGTCTGGCATTAAGTTGTCGGGCAGGGGATACCCATCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "confidence": 0.8 }, { "method": "VSEARCH", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "accession": "DQ455710.1.1310_U", "identity": 0.986, "query_cover": 0.9952 } ] }
organismQuantity	2.0

id	2c6f179f-80ba-4b9c-b7e1-0846a2f30dcb
scientificName	Chaetoceros decipiens
AphiaID	149126
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S81
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGAATTTCTGGTGGGAGAATGCAGTCCAACCTTAGGGTTGGTACTCGCACTCTCCGGCCATCCTTGGGTGGAGCCTGTCTGGCATTAAGTTGTCGGGCAGGGGATACCCATCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "confidence": 0.88 }, { "method": "VSEARCH", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "accession": "DQ455710.1.1310_U", "identity": 0.986, "query_cover": 0.9952 } ] }
organismQuantity	1.0

Chaetoceros decipiens in Fiji

Status

Chaetoceros decipiens does not have an offial status in Fiji.

Notes

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