| Occurrences: |
view occurrences
| id |
375348f0-eb75-4abf-b0ef-b1e508334f40
|
| scientificName |
Pyura
|
| eventDate |
2023-05-31
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
USP-24-01-27
|
| target_gene |
18S
|
| DNA_sequence |
TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Pyura",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103524",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Metandrocarpa_taylori",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:250836",
"accession": "AY903922.1.1772_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Halocynthia_roretzi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:250680",
"accession": "AB013016.1.1751_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Cnemidocarpa_finmarkiensis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103870",
"accession": "L12413.1.1763_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Pyura_haustor",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251266",
"accession": "AY903926.1.1774_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Halocynthia_igaboja",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:250677",
"accession": "AY903925.1.1772_U",
"identity": 1,
"query_cover": 0.9938
}
]
}
|
| organismQuantity |
37.0
|
| id |
65f887a8-4643-4da4-a822-d473bec1a4ac
|
| scientificName |
Pyura
|
| eventDate |
2023-05-31
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
USP-24-01-26
|
| target_gene |
18S
|
| DNA_sequence |
TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Pyura",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103524",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Metandrocarpa_taylori",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:250836",
"accession": "AY903922.1.1772_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Halocynthia_roretzi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:250680",
"accession": "AB013016.1.1751_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Cnemidocarpa_finmarkiensis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103870",
"accession": "L12413.1.1763_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Pyura_haustor",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251266",
"accession": "AY903926.1.1774_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Halocynthia_igaboja",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:250677",
"accession": "AY903925.1.1772_U",
"identity": 1,
"query_cover": 0.9938
}
]
}
|
| organismQuantity |
37.0
|
| id |
1fe76c2f-757f-4051-826d-31a070992d28
|
| scientificName |
Pyura
|
| eventDate |
2023-05-31
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
USP-24-01-28
|
| target_gene |
18S
|
| DNA_sequence |
TGTTGGTTTTCGGAGCGCGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Pyura",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103524",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Metandrocarpa_taylori",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:250836",
"accession": "AY903922.1.1772_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Halocynthia_roretzi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:250680",
"accession": "AB013016.1.1751_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Cnemidocarpa_finmarkiensis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103870",
"accession": "L12413.1.1763_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Pyura_haustor",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:251266",
"accession": "AY903926.1.1774_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Halocynthia_igaboja",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:250677",
"accession": "AY903925.1.1772_U",
"identity": 1,
"query_cover": 0.9938
}
]
}
|
| organismQuantity |
33.0
|
|