PacMAN decision support system

Potential detection of Perophora japonica in Fiji

Description:

Potential detection of Perophora japonica with confidence medium on 2024-02-28 in material sample USP-24-01-202, marker 18S

Confidence:

medium

Risk:

medium view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Perophora japonica
Chordata > Ascidiacea > Phlebobranchia > Perophoridae
WoRMS: 103758

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

599.0

Names:

2

Occurrences:

view occurrences

id	7fb40a46-29e8-460c-a50e-eed9ac88eeaf
scientificName	Perophora japonica
AphiaID	103758
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-202
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGACCTGGCCTTACCTTCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGGCGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Perophora japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "confidence": 0.94 }, { "method": "VSEARCH", "scientificName": "Perophora_japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "accession": "AB499607.1.1752_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662244.1.1230_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662235.1.1233_U", "identity": 0.986, "query_cover": 0.9952 } ] }
organismQuantity	599.0

id	39f47400-d25d-4fc7-bd46-3f057ca44864
scientificName	Perophora japonica
AphiaID	103758
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-201
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGACCTGGCCTTACCTTCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGGCGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Perophora japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "confidence": 0.94 }, { "method": "VSEARCH", "scientificName": "Perophora_japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "accession": "AB499607.1.1752_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662244.1.1230_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662235.1.1233_U", "identity": 0.986, "query_cover": 0.9952 } ] }
organismQuantity	420.0

id	3b4f7c41-26f4-4cc0-9df5-03c8c975c174
scientificName	Perophora japonica
AphiaID	103758
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-200
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGACCTGGCCTTACCTTCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGGCGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Perophora japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "confidence": 0.94 }, { "method": "VSEARCH", "scientificName": "Perophora_japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "accession": "AB499607.1.1752_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662244.1.1230_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662235.1.1233_U", "identity": 0.986, "query_cover": 0.9952 } ] }
organismQuantity	15.0

id	ad8e1182-0b38-4dc7-adde-ece5947a21ad
scientificName	Perophora japonica
AphiaID	103758
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-197
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGACCTGGCCTTACCTTCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGGCGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Perophora japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "confidence": 0.94 }, { "method": "VSEARCH", "scientificName": "Perophora_japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "accession": "AB499607.1.1752_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662244.1.1230_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662235.1.1233_U", "identity": 0.986, "query_cover": 0.9952 } ] }
organismQuantity	5.0

id	c2a0df32-98a8-4282-8e2c-e47e2f37de78
scientificName	Perophora japonica
AphiaID	103758
eventDate	2024-02-28
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-194
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGACCTGGCCTTACCTTCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGGCGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Perophora japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "confidence": 0.94 }, { "method": "VSEARCH", "scientificName": "Perophora_japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "accession": "AB499607.1.1752_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662244.1.1230_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662235.1.1233_U", "identity": 0.986, "query_cover": 0.9952 } ] }
organismQuantity	2.0

id	ee0089a6-88fb-42ca-8f66-e8d51d9c0762
scientificName	Perophora japonica
AphiaID	103758
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-196
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGACCTGGCCTTACCTTCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGGCGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Perophora japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "confidence": 0.94 }, { "method": "VSEARCH", "scientificName": "Perophora_japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "accession": "AB499607.1.1752_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662244.1.1230_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662235.1.1233_U", "identity": 0.986, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	21860479-d5b7-4116-baa4-f2deafe52b45
scientificName	Perophora japonica
AphiaID	103758
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-202
target_gene	18S
DNA_sequence	TGACGCGGTTATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCTGGTCCGTCGCAAGGCGTGCACTGGCCGACCTGGCCTTACCTTCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGACGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Perophora japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Perophora_japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "accession": "AB499607.1.1752_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 0.971, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	59.0

id	aa8ffcb3-d247-4d7c-81f5-bd03b4d3ac9e
scientificName	Perophora japonica
AphiaID	103758
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-202
target_gene	18S
DNA_sequence	TGACGCGGTTATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGACCTGGCCTTACCTTCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGACGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Perophora japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "confidence": 0.93 }, { "method": "VSEARCH", "scientificName": "Perophora_japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "accession": "AB499607.1.1752_U", "identity": 0.981, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.976, "query_cover": 0.9952 } ] }
organismQuantity	28.0

id	ee3074cf-247f-45cb-a8fb-2c05085b9130
scientificName	Perophora japonica
AphiaID	103758
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-201
target_gene	18S
DNA_sequence	TGACGCGGTTATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGACCTGGCCTTACCTTCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGACGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Perophora japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "confidence": 0.93 }, { "method": "VSEARCH", "scientificName": "Perophora_japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "accession": "AB499607.1.1752_U", "identity": 0.981, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.976, "query_cover": 0.9952 } ] }
organismQuantity	17.0

id	c493bd0b-710f-4481-9cd6-6f03a142138e
scientificName	Perophora japonica
AphiaID	103758
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-201
target_gene	18S
DNA_sequence	TGACGCGGTTATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCTGGTCCGTCGCAAGGCGTGCACTGGCCGACCTGGCCTTACCTTCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGACGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Perophora japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Perophora_japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "accession": "AB499607.1.1752_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 0.971, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	4.0

Perophora japonica in Fiji

Status

Perophora japonica does not have an offial status in Fiji.

Notes

No notes found.