PacMAN decision support system

Potential detection of Saccostrea cuccullata in Fiji

Description:

Potential detection of Saccostrea cuccullata with confidence low on 2022-02-01 in material sample S106, marker COI

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Saccostrea cuccullata
Mollusca > Bivalvia > Ostreida > Ostreidae
WoRMS: 181316

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

Reads:

85.0

Names:

Occurrences:

view occurrences

id	21dbe173-800c-4854-b8b7-581a9527a580
scientificName	Saccostrea cuccullata
AphiaID	181316
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S106
target_gene	COI
DNA_sequence	ATTATCTACTTTTTCGTATCATGGGATGTGTATGGATCTGGCTATTTTGAGACTTCATTTAGCCGGTATTAGGTCAATTTTTAGTTCGATTAATTTTATAGTGACTATTAAAAATATGCGTTCTGTAGATGGCCACTTGTTAAGGCTATTTCCGTGATCAATTAAGGTAACTTCTTTTTTGCTGCTGACAACTTTGCCTGTATTAGCCGGAGGTCTTACTATGCTTTTAACAGACCGACACTTTAACACCTCATTTTTCGACCCTGTAGGTGGGGGGGATCCAATTTTATTCCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Saccostrea cucullata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:224654", "confidence": 0.87 } ] }
organismQuantity	85.0

id	26cac0da-0d96-4b26-aa8c-166570d5c0be
scientificName	Saccostrea cuccullata
AphiaID	181316
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S97
target_gene	COI
DNA_sequence	ATTATCTACTTTTTCGTATCATGGGATGTGTATGGATCTGGCTATTTTGAGACTTCATTTAGCCGGTATTAGGTCAATTTTTAGTTCGATTAATTTTATAGTGACTATTAAAAATATGCGTTCTGTAGATGGCCACTTGTTAAGGCTATTTCCGTGATCAATTAAGGTAACTTCTTTTTTGCTGCTGACAACTTTGCCTGTATTAGCCGGAGGTCTTACTATGCTTTTAACAGACCGACACTTTAACACCTCATTTTTCGACCCTGTAGGTGGGGGGGATCCAATTTTATTCCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Saccostrea cucullata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:224654", "confidence": 0.87 } ] }
organismQuantity	62.0

id	529deff5-6e35-4ae5-b409-2ee1bf978eb2
scientificName	Saccostrea cuccullata
AphiaID	181316
eventDate	2022-02-01
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S107
target_gene	COI
DNA_sequence	ATTATCTACTTTTTCGTATCATGGGATGTGTATGGATCTGGCTATTTTGAGACTTCATTTAGCCGGTATTAGGTCAATTTTTAGTTCGATTAATTTTATAGTGACTATTAAAAATATGCGTTCTGTAGATGGCCACTTGTTAAGGCTATTTCCGTGATCAATTAAGGTAACTTCTTTTTTGCTGCTGACAACTTTGCCTGTATTAGCCGGAGGTCTTACTATGCTTTTAACAGACCGACACTTTAACACCTCATTTTTCGACCCTGTAGGTGGGGGGGATCCAATTTTATTCCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Saccostrea cucullata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:224654", "confidence": 0.87 } ] }
organismQuantity	54.0

id	be504d49-f813-4a4e-8747-4d71ee41ae59
scientificName	Saccostrea cuccullata
AphiaID	181316
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S132
target_gene	COI
DNA_sequence	ATTATCTACTTTTTCGTATCATGGGATGTGTATGGATCTGGCTATTTTGAGACTTCATTTAGCCGGTATTAGGTCAATTTTTAGTTCGATTAATTTTATAGTGACTATTAAAAATATGCGTTCTGTAGATGGCCACTTGTTAAGGCTATTTCCGTGATCAATTAAGGTAACTTCTTTTTTGCTGCTGACAACTTTGCCTGTATTAGCCGGAGGTCTTACTATGCTTTTAACAGACCGACACTTTAACACCTCATTTTTCGACCCTGTAGGTGGGGGGGATCCAATTTTATTCCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Saccostrea cucullata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:224654", "confidence": 0.87 } ] }
organismQuantity	16.0

id	83015ce7-a519-45ee-b186-3be2192828e9
scientificName	Saccostrea cuccullata
AphiaID	181316
eventDate	2022-02-01
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S108
target_gene	COI
DNA_sequence	ATTATCTACTTTTTCGTATCATGGGATGTGTATGGATCTGGCTATTTTGAGACTTCATTTAGCCGGTATTAGGTCAATTTTTAGTTCGATTAATTTTATAGTGACTATTAAAAATATGCGTTCTGTAGATGGCCACTTGTTAAGGCTATTTCCGTGATCAATTAAGGTAACTTCTTTTTTGCTGCTGACAACTTTGCCTGTATTAGCCGGAGGTCTTACTATGCTTTTAACAGACCGACACTTTAACACCTCATTTTTCGACCCTGTAGGTGGGGGGGATCCAATTTTATTCCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Saccostrea cucullata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:224654", "confidence": 0.87 } ] }
organismQuantity	13.0

id	917edf43-0185-4bbe-9ec8-3ad528125459
scientificName	Saccostrea cuccullata
AphiaID	181316
eventDate	2022-02-01
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S91
target_gene	COI
DNA_sequence	ATTATCTACTTTTTCGTATCATGGGATGTGTATGGATCTGGCTATTTTGAGACTTCATTTAGCCGGTATTAGGTCAATTTTTAGTTCGATTAATTTTATAGTGACTATTAAAAATATGCGTTCTGTAGATGGCCACTTGTTAAGGCTATTTCCGTGATCAATTAAGGTAACTTCTTTTTTGCTGCTGACAACTTTGCCTGTATTAGCCGGAGGTCTTACTATGCTTTTAACAGACCGACACTTTAACACCTCATTTTTCGACCCTGTAGGTGGGGGGGATCCAATTTTATTCCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Saccostrea cucullata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:224654", "confidence": 0.87 } ] }
organismQuantity	11.0

id	2f1e8091-e3bb-4bd1-ac6f-99f2e5d30b50
scientificName	Saccostrea cuccullata
AphiaID	181316
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S93
target_gene	COI
DNA_sequence	ATTATCTACTTTTTCGTATCATGGGATGTGTATGGATCTGGCTATTTTGAGACTTCATTTAGCCGGTATTAGGTCAATTTTTAGTTCGATTAATTTTATAGTGACTATTAAAAATATGCGTTCTGTAGATGGCCACTTGTTAAGGCTATTTCCGTGATCAATTAAGGTAACTTCTTTTTTGCTGCTGACAACTTTGCCTGTATTAGCCGGAGGTCTTACTATGCTTTTAACAGACCGACACTTTAACACCTCATTTTTCGACCCTGTAGGTGGGGGGGATCCAATTTTATTCCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Saccostrea cucullata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:224654", "confidence": 0.87 } ] }
organismQuantity	7.0

id	ce0a39de-7bab-4de2-9e87-a954cff1bd35
scientificName	Saccostrea cuccullata
AphiaID	181316
eventDate	2022-02-01
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S92
target_gene	COI
DNA_sequence	ATTATCTACTTTTTCGTATCATGGGATGTGTATGGATCTGGCTATTTTGAGACTTCATTTAGCCGGTATTAGGTCAATTTTTAGTTCGATTAATTTTATAGTGACTATTAAAAATATGCGTTCTGTAGATGGCCACTTGTTAAGGCTATTTCCGTGATCAATTAAGGTAACTTCTTTTTTGCTGCTGACAACTTTGCCTGTATTAGCCGGAGGTCTTACTATGCTTTTAACAGACCGACACTTTAACACCTCATTTTTCGACCCTGTAGGTGGGGGGGATCCAATTTTATTCCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Saccostrea cucullata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:224654", "confidence": 0.87 } ] }
organismQuantity	4.0

Saccostrea cuccullata does not have an offial status in Fiji.

No notes found.