| Occurrences: |
view occurrences
| id |
2244515a-364a-4617-88ef-7c53b5d6e115
|
| scientificName |
Apolemia
|
| eventDate |
2023-05-31
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
USP-24-01-26
|
| target_gene |
18S
|
| DNA_sequence |
TTGTTGGTTTCTAGGACCGAAGTAATGATTAAGAGGGACAATTGGGGGCATCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Apolemia sp.",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Clava_multicornis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117426",
"accession": "JQ407367.1.1618_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Hydrozoa_X_sp.",
"accession": "HQ867466.1.870_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Hydrozoa_X_sp.",
"accession": "KC583172.1.1095_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Hydrozoa_X_sp.",
"accession": "JQ955782.1.960_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Hydrozoa_X_sp.",
"accession": "HQ867240.1.879_U",
"identity": 1,
"query_cover": 0.9938
}
]
}
|
| organismQuantity |
20.0
|
| id |
bae450bd-5ff3-4f91-a23d-f7285ad4c3a9
|
| scientificName |
Apolemia
|
| eventDate |
2023-05-31
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
USP-24-01-27
|
| target_gene |
18S
|
| DNA_sequence |
TTGTTGGTTTCTAGGACCGAAGTAATGATTAAGAGGGACAATTGGGGGCATCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Apolemia sp.",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Clava_multicornis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117426",
"accession": "JQ407367.1.1618_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Hydrozoa_X_sp.",
"accession": "HQ867466.1.870_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Hydrozoa_X_sp.",
"accession": "KC583172.1.1095_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Hydrozoa_X_sp.",
"accession": "JQ955782.1.960_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Hydrozoa_X_sp.",
"accession": "HQ867240.1.879_U",
"identity": 1,
"query_cover": 0.9938
}
]
}
|
| organismQuantity |
17.0
|
| id |
a19ccd4a-f98f-4069-bdc2-add54b87b3cc
|
| scientificName |
Apolemia
|
| eventDate |
2023-05-31
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
USP-24-01-28
|
| target_gene |
18S
|
| DNA_sequence |
TTGTTGGTTTCTAGGACCGAAGTAATGATTAAGAGGGACAATTGGGGGCATCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Apolemia sp.",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Clava_multicornis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117426",
"accession": "JQ407367.1.1618_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Hydrozoa_X_sp.",
"accession": "HQ867466.1.870_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Hydrozoa_X_sp.",
"accession": "KC583172.1.1095_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Hydrozoa_X_sp.",
"accession": "JQ955782.1.960_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Hydrozoa_X_sp.",
"accession": "HQ867240.1.879_U",
"identity": 1,
"query_cover": 0.9938
}
]
}
|
| organismQuantity |
14.0
|
|