PacMAN decision support system

Potential detection of Ascidia gemmata in Fiji

Description:

Potential detection of Ascidia gemmata with confidence medium on 2024-02-28 in material sample USP-24-01-212, marker COI

Confidence:

medium

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Ascidia gemmata
Chordata > Ascidiacea > Phlebobranchia > Ascidiidae
WoRMS: 249992

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

12.0

Names:

1

Occurrences:

view occurrences

id	f440c293-37b1-47db-8d81-df1d50d02ec7
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
eventID	SUVA2_20240228_S2A
materialSampleID	USP-24-01-212
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGGTTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "accession": "KX650763", "identity": 1, "query_cover": 0.995 } ] }
organismQuantity	12.0

id	ac921997-32a5-442c-a6dc-8ddbbea9e171
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
eventID	SUVA2_20240228_S2B
materialSampleID	USP-24-01-213
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGGTTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "accession": "KX650763", "identity": 1, "query_cover": 0.995 } ] }
organismQuantity	1.0

id	42183120-0345-4b8b-a1b7-7eefdc02cb04
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
eventID	SUVA2_20240228_S2A
materialSampleID	USP-24-01-212
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGGTTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCTGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	16247.0

id	9731a22c-4558-45da-93a5-0ba4572360df
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
eventID	SUVA2_20240228_S2A
materialSampleID	USP-24-01-212
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACCTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGATTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCCGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	4039.0

id	90939b2d-4ed7-429e-8254-8dd657df16cc
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
eventID	SUVA2_20240228_S2C
materialSampleID	USP-24-01-214
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGGTTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCTGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	1465.0

id	7cfbea7e-c3f8-49f2-9e5b-cc40ecd1d10b
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
eventID	SUVA2_20240228_S2A
materialSampleID	USP-24-01-212
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGGTTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCCGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	353.0

id	a3878f77-6901-40ec-a61d-016b133a5a8a
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
eventID	SUVA2_20240228_S2B
materialSampleID	USP-24-01-213
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGGTTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCTGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	326.0

id	2b408d4c-9d63-4ecf-b17f-8cb21fccd856
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
eventID	SUVA2_20240228_S2A
materialSampleID	USP-24-01-212
target_gene	COI
DNA_sequence	TGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCTGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 0.99 } ] }
organismQuantity	34.0

id	22bb9fb6-6684-4681-b812-4f23b0ea9793
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
eventID	SUVA2_20240228_S2C
materialSampleID	USP-24-01-214
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGGTTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCCGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	7.0

id	23548d72-eef9-49dc-8238-83f91216c5fd
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
eventID	SUVA2_20240228_WB
materialSampleID	USP-24-01-209
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACCTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGATTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCCGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	3.0

id	aa35bd2e-4510-474d-a4f3-eb41ecfa5b74
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
eventID	SUVA2_20240228_S2C
materialSampleID	USP-24-01-214
target_gene	COI
DNA_sequence	TGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCTGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 0.99 } ] }
organismQuantity	3.0

id	4d3d4afb-771b-4e75-8dbd-67aba4fb449b
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
eventID	SUVA2_20240228_S2B
materialSampleID	USP-24-01-213
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGGTTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCCGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	1.0

Ascidia gemmata in Fiji

Status

Ascidia gemmata does not have an offial status in Fiji.

Notes

No notes found.