PacMAN decision support system

Potential detection of Clytia linearis in Fiji

Description:

Potential detection of Clytia linearis with confidence medium on 2023-05-31 in material sample USP-24-01-26, marker 18S

Confidence:

medium

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Clytia linearis
Cnidaria > Hydrozoa > Leptothecata > Campanulariidae
WoRMS: 117370

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

12.0

Names:

Occurrences:

view occurrences

id	aa2ffc61-8c13-4776-abed-4423a081afc9
scientificName	Clytia linearis
AphiaID	117370
eventDate	2023-05-31
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-26
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTGGGGCGCTGGTGGGACGGTCGGCCGCGAGGTCTGTTACTGTCTCTCCGTGCCATCACATTCTCGGAGACCCGTCGTGCACTTCGCTGTGCGCGGCGTGGGACTCGAGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Clytia linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789747.1.1693_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "DQ064794.1.1691_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789748.1.1565_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	12.0

id	c670fc7b-fe38-4b1f-a816-4f39fbcaca14
scientificName	Clytia
eventDate	2023-05-31
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-26
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAAAACCGCAGTAATGATTAAGAGGGACAATTGGGGGCGTCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCATTCGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Clytia", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117030", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789747.1.1693_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "DQ064794.1.1691_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789748.1.1565_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_sp.", "accession": "KF962233.1.1714_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_sp.", "accession": "KF962234.1.1714_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	12.0

id	23a010a2-7a06-475e-b62f-93ab110f345b
scientificName	Clytia
eventDate	2023-05-31
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-28
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAAAACCGCAGTAATGATTAAGAGGGACAATTGGGGGCGTCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCATTCGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Clytia", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117030", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789747.1.1693_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "DQ064794.1.1691_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789748.1.1565_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_sp.", "accession": "KF962233.1.1714_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_sp.", "accession": "KF962234.1.1714_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	1.0

id	e6e5e0e8-b949-4203-bb35-57e3e6d7f3aa
scientificName	Clytia linearis
AphiaID	117370
eventDate	2023-05-31
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-28
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTGGGGCGCTGGTGGGACGGTCGGCCGCGAGGTCTGTTACTGTCTCTCCGTGCCATCACATTCTCGGAGACCCGTCGTGCACTTCGCTGTGCGCGGCGTGGGACTCGAGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Clytia linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789747.1.1693_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "DQ064794.1.1691_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789748.1.1565_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	1.0

Clytia linearis in Fiji

Status

Clytia linearis does not have an offial status in Fiji.

Notes

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