| Occurrences: |
view occurrences
| id |
250f38f0-5158-4d1a-bfb0-f6ca555f741d
|
| scientificName |
Moerisia inkermanica
|
| AphiaID |
117761
|
| eventDate |
2023-11-28
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| materialSampleID |
USP-24-01-68
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGATGAACCGTTGGTCCGCCGCAAGGTGTGTTAACTAACTGGTTTGTTCTTCTTCGCAAAGACGCCTCATGTGCTTCACCGCATGTGTTGTGGATTTGTGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Moerisia inkermanica",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117761",
"confidence": 0.94
},
{
"method": "VSEARCH",
"scientificName": "Moerisia_inkermanica",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117761",
"accession": "GQ424340.1.1794_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Moerisia_sp.",
"accession": "AF358083.1.1821_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Moerisia_inkermanica",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117761",
"accession": "KF962285.1.1688_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Moerisia_inkermanica",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117761",
"accession": "KF962286.1.1688_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Moerisia_inkermanica",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117761",
"accession": "KF962287.1.1688_U",
"identity": 0.99,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
8.0
|
| id |
c1ac8f86-9871-49b1-a863-1f19bf7315bf
|
| scientificName |
Moerisia inkermanica
|
| AphiaID |
117761
|
| eventDate |
2023-11-28
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| materialSampleID |
USP-24-01-67
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGATGAACCGTTGGTCCGCCGCAAGGTGTGTTAACTAACTGGTTTGTTCTTCTTCGCAAAGACGCCTCATGTGCTTCACCGCATGTGTTGTGGATTTGTGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Moerisia inkermanica",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117761",
"confidence": 0.94
},
{
"method": "VSEARCH",
"scientificName": "Moerisia_inkermanica",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117761",
"accession": "GQ424340.1.1794_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Moerisia_sp.",
"accession": "AF358083.1.1821_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Moerisia_inkermanica",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117761",
"accession": "KF962285.1.1688_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Moerisia_inkermanica",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117761",
"accession": "KF962286.1.1688_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Moerisia_inkermanica",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117761",
"accession": "KF962287.1.1688_U",
"identity": 0.99,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
1.0
|
|