PacMAN decision support system

Potential detection of Nemalecium lighti in Fiji

Description:

Potential detection of Nemalecium lighti with confidence medium on 2023-11-28 in material sample USP-24-01-169, marker COI

Confidence:

medium

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Nemalecium lighti
Cnidaria > Hydrozoa > Leptothecata > Haleciidae
WoRMS: 290449

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

2380.0

Names:

Occurrences:

view occurrences

id	622e6eaf-71b6-45d5-ba4a-a02a7b944ccf
scientificName	Nemalecium lighti
AphiaID	290449
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20231128_S2A
materialSampleID	USP-24-01-169
target_gene	COI
DNA_sequence	TTTATCAAATCAAGTAGCTCATTCTGGTCCCTCAGTAGATCTAGTTATATTTAGCTTACATTGCGCAGGGGCAGCATCAATCATGGGAGCTATTAATTTTATTACTACTATATTTAATATGAGAGCTCCTGGACTATCCTTTGATAAACTACCCTTATTTATATGATCATTACTTGTAACTGCATTTCTATTATTACTATCACTACCTGTATTAGCAGGGGCAATAACCATGCTATTAACTGATAGAAATTTTAATACTACGTTCTTTGATCCAGCAGGAGGAGGAGATCCAATTCTATTTCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Nemalecium lighti", "scientificNameID": "urn:lsid:marinespecies.org:taxname:290449", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Nemalecium lighti", "scientificNameID": "urn:lsid:marinespecies.org:taxname:290449", "accession": "MW277710", "identity": 1, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Nemalecium lighti", "scientificNameID": "urn:lsid:marinespecies.org:taxname:290449", "accession": "MZ474846", "identity": 0.971, "query_cover": 0.9968 } ] }
organismQuantity	2380.0

id	5e543f59-3903-4216-94eb-7489f98dc190
scientificName	Nemalecium lighti
AphiaID	290449
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20231128_S2C
materialSampleID	USP-24-01-171
target_gene	COI
DNA_sequence	TTTATCAAATCAAGTAGCTCATTCTGGTCCCTCAGTAGATCTAGTTATATTTAGCTTACATTGCGCAGGGGCAGCATCAATCATGGGAGCTATTAATTTTATTACTACTATATTTAATATGAGAGCTCCTGGACTATCCTTTGATAAACTACCCTTATTTATATGATCATTACTTGTAACTGCATTTCTATTATTACTATCACTACCTGTATTAGCAGGGGCAATAACCATGCTATTAACTGATAGAAATTTTAATACTACGTTCTTTGATCCAGCAGGAGGAGGAGATCCAATTCTATTTCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Nemalecium lighti", "scientificNameID": "urn:lsid:marinespecies.org:taxname:290449", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Nemalecium lighti", "scientificNameID": "urn:lsid:marinespecies.org:taxname:290449", "accession": "MW277710", "identity": 1, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Nemalecium lighti", "scientificNameID": "urn:lsid:marinespecies.org:taxname:290449", "accession": "MZ474846", "identity": 0.971, "query_cover": 0.9968 } ] }
organismQuantity	12.0

id	de7f5e79-ed21-48a3-ab2a-96b7c6f1c358
scientificName	Nemalecium lighti
AphiaID	290449
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20231128_S2B
materialSampleID	USP-24-01-170
target_gene	COI
DNA_sequence	TTTATCAAATCAAGTAGCTCATTCTGGTCCCTCAGTAGATCTAGTTATATTTAGCTTACATTGCGCAGGGGCAGCATCAATCATGGGAGCTATTAATTTTATTACTACTATATTTAATATGAGAGCTCCTGGACTATCCTTTGATAAACTACCCTTATTTATATGATCATTACTTGTAACTGCATTTCTATTATTACTATCACTACCTGTATTAGCAGGGGCAATAACCATGCTATTAACTGATAGAAATTTTAATACTACGTTCTTTGATCCAGCAGGAGGAGGAGATCCAATTCTATTTCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Nemalecium lighti", "scientificNameID": "urn:lsid:marinespecies.org:taxname:290449", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Nemalecium lighti", "scientificNameID": "urn:lsid:marinespecies.org:taxname:290449", "accession": "MW277710", "identity": 1, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Nemalecium lighti", "scientificNameID": "urn:lsid:marinespecies.org:taxname:290449", "accession": "MZ474846", "identity": 0.971, "query_cover": 0.9968 } ] }
organismQuantity	10.0

id	6abf20ef-b20e-4127-8631-6a716a731172
scientificName	Nemalecium lighti
AphiaID	290449
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20231128_S3A
materialSampleID	USP-24-01-172
target_gene	COI
DNA_sequence	TTTATCAAATCAAGTAGCTCATTCTGGTCCCTCAGTAGATCTAGTTATATTTAGCTTACATTGCGCAGGGGCAGCATCAATCATGGGAGCTATTAATTTTATTACTACTATATTTAATATGAGAGCTCCTGGACTATCCTTTGATAAACTACCCTTATTTATATGATCATTACTTGTAACTGCATTTCTATTATTACTATCACTACCTGTATTAGCAGGGGCAATAACCATGCTATTAACTGATAGAAATTTTAATACTACGTTCTTTGATCCAGCAGGAGGAGGAGATCCAATTCTATTTCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Nemalecium lighti", "scientificNameID": "urn:lsid:marinespecies.org:taxname:290449", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Nemalecium lighti", "scientificNameID": "urn:lsid:marinespecies.org:taxname:290449", "accession": "MW277710", "identity": 1, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Nemalecium lighti", "scientificNameID": "urn:lsid:marinespecies.org:taxname:290449", "accession": "MZ474846", "identity": 0.971, "query_cover": 0.9968 } ] }
organismQuantity	3.0

id	aa776c37-fee1-4fc8-a120-6034e2c6f024
scientificName	Nemalecium lighti
AphiaID	290449
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20231128_S2A
materialSampleID	USP-24-01-169
target_gene	COI
DNA_sequence	TTTATCAAATCAAGTAGCTCATTCTGGTCCCTCAGTAGATCTAGTTATATTTAGCTTACATTGCGCAGGGGCAGCATCAATCATGGGAGCTATTAATTTTATTACTACTATATTTAATATGAGAGCTCCTGGACTATCCTTTGATAAACTACCCTTATTTATATGATCATTACTTGTAACTGCATTTCTATTATTACTAT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Nemalecium lighti", "scientificNameID": "urn:lsid:marinespecies.org:taxname:290449", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Nemalecium lighti", "scientificNameID": "urn:lsid:marinespecies.org:taxname:290449", "accession": "MW277710", "identity": 1, "query_cover": 0.995 }, { "method": "VSEARCH", "scientificName": "Nemalecium lighti", "scientificNameID": "urn:lsid:marinespecies.org:taxname:290449", "accession": "MZ474846", "identity": 0.97, "query_cover": 0.995 } ] }
organismQuantity	2.0

id	25a4864a-6093-4658-90eb-06d7f4f74a54
scientificName	Nemalecium lighti
AphiaID	290449
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20231128_WC
materialSampleID	USP-24-01-165
target_gene	COI
DNA_sequence	TTTATCAAATCAAGTAGCTCATTCTGGTCCCTCAGTAGATCTAGTTATATTTAGCTTACATTGCGCAGGGGCAGCATCAATCATGGGAGCTATTAATTTTATTACTACTATATTTAATATGAGAGCTCCTGGACTATCCTTTGATAAACTACCCTTATTTATATGATCATTACTTGTAACTGCATTTCTATTATTACTATCACTACCTGTATTAGCAGGGGCAATAACCATGCTATTAACTGATAGAAATTTTAATACTACGTTCTTTGATCCAGCAGGAGGAGGAGATCCAATTCTATTTCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Nemalecium lighti", "scientificNameID": "urn:lsid:marinespecies.org:taxname:290449", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Nemalecium lighti", "scientificNameID": "urn:lsid:marinespecies.org:taxname:290449", "accession": "MW277710", "identity": 1, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Nemalecium lighti", "scientificNameID": "urn:lsid:marinespecies.org:taxname:290449", "accession": "MZ474846", "identity": 0.971, "query_cover": 0.9968 } ] }
organismQuantity	1.0

Nemalecium lighti in Fiji

Status

Nemalecium lighti does not have an offial status in Fiji.

Notes

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