| Occurrences: |
view occurrences
| id |
f13f26a6-6cb5-46f5-9489-f62e5e6bee15
|
| scientificName |
Schizoporella pungens
|
| AphiaID |
422363
|
| eventDate |
2022-11-23
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S174
|
| target_gene |
COI
|
| DNA_sequence |
ACTGTCATCTAACATTTCACATAGAGGACCATCAGTAGATCTAGCAATTTTTTCACTCCATCTAGCAGGAATTTCATCAATCTTAGGTTCAATTAATTTTATAACAACAATTATTAACATACGAAGAGAGAAAATAGTTATGATACGAACACCTCTATTAGCCTGAGCCATTTTTATCACAGCACTTCTCCTACTTCTTTCATTACCAGTGCTTGCAGGGGCCATTACTATACTTCTAACAGACCGGAATCTAAACACTTCTTTCTTTGACCCAGCCGGAGGTGGAGACCCTATTCTATTCCAACACCTATTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MW278797",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella errata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111527",
"accession": "MZ778858",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359652",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359653",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359654",
"identity": 0.994,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
8.0
|
| id |
25fdf58d-6c59-4c66-b9a3-097e2edb2bba
|
| scientificName |
Schizoporella pungens
|
| AphiaID |
422363
|
| eventDate |
2022-11-23
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| materialSampleID |
S178
|
| target_gene |
COI
|
| DNA_sequence |
ACTGTCATCTAACATTTCACATAGAGGACCATCAGTAGATCTAGCAATTTTTTCACTCCATCTAGCAGGAATTTCATCAATCTTAGGTTCAATTAATTTTATAACAACAATTATTAACATACGAAGAGAGAAAATAGTTATGATACGAACACCTCTATTAGCCTGAGCCATTTTTATCACAGCACTTCTCCTACTTCTTTCATTACCAGTGCTTGCAGGGGCCATTACTATACTTCTAACAGACCGGAATCTAAACACTTCTTTCTTTGACCCAGCCGGAGGTGGAGACCCTATTCTATTCCAACACCTATTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MW278797",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella errata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111527",
"accession": "MZ778858",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359652",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359653",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359654",
"identity": 0.994,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
1.0
|
|