| Occurrences: |
view occurrences
| id |
2621d160-9d96-46c3-aa0f-7907e77ec8ae
|
| scientificName |
Saccostrea cuccullata
|
| AphiaID |
181316
|
| eventDate |
2021-12-07
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
S139
|
| target_gene |
COI
|
| DNA_sequence |
ATTATCTACTTTTTCGTATCATGGGATGTGTATGGATCTGGCTATTTTGAGACTTCATTTAGCCGGTATTAGGTCAATTTTTAGTTCGATTAATTTTATAGTGACTATTAAAAATATGCGTTCTGTAGATGGCCACTTGTTAAGGCTATTTCCGTGATCAATTAAGGTAACTTCTTTTTTGCTGCTGACAACTTTGCCTGTATTAGCCGGAGGTCTTACTATGCTTTTAACAGACCGACACTTTAACACCTCATTTTTCGACCCTGTAGGTGGGGGGGATCCAATTTTATTCCAGCATTTGTTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Saccostrea cucullata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:224654",
"confidence": 0.87
}
]
}
|
| organismQuantity |
1048.0
|
| id |
7eae49f6-ab6b-4b33-ac30-adb27d57a025
|
| scientificName |
Saccostrea cuccullata
|
| AphiaID |
181316
|
| eventDate |
2021-12-07
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| materialSampleID |
S119
|
| target_gene |
COI
|
| DNA_sequence |
ATTATCTACTTTTTCGTATCATGGGATGTGTATGGATCTGGCTATTTTGAGACTTCATTTAGCCGGTATTAGGTCAATTTTTAGTTCGATTAATTTTATAGTGACTATTAAAAATATGCGTTCTGTAGATGGCCACTTGTTAAGGCTATTTCCGTGATCAATTAAGGTAACTTCTTTTTTGCTGCTGACAACTTTGCCTGTATTAGCCGGAGGTCTTACTATGCTTTTAACAGACCGACACTTTAACACCTCATTTTTCGACCCTGTAGGTGGGGGGGATCCAATTTTATTCCAGCATTTGTTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Saccostrea cucullata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:224654",
"confidence": 0.87
}
]
}
|
| organismQuantity |
1.0
|
|