| Occurrences: |
view occurrences
| id |
bce05d76-45f2-477c-94e9-a476a508d008
|
| scientificName |
Amphibalanus amphitrite
|
| AphiaID |
421137
|
| eventDate |
2023-08-15
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| eventID |
SUVA3_20230815_PC
|
| materialSampleID |
USP-24-01-146
|
| target_gene |
COI
|
| DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGTGCTTCAGTTGACTTATCAATTTTCTCTTTACATTTAGCGGGTGCTTCGTCAATTTTAGGTGCCATTAATTTTATGTCTACAGTTATTAACATACGAGCTGAAACACTGACATTTGATCGACTTCCATTATTTGTCTGAAGAGTATTTATTACTGTAATTCTTTTACTTTTATCACTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTAACAGATCGAAATCTGAATACCTCATTTTTTGATCCAACAGGAGGTGGAGATCCAATCTTATACCAACATCTATTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "JQ035516",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211366",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211368",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211371",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211373",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
19.0
|
| id |
2843e913-c7a8-4225-873f-79d97552598d
|
| scientificName |
Amphibalanus amphitrite
|
| AphiaID |
421137
|
| eventDate |
2023-08-15
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| eventID |
SUVA3_20230815_WC
|
| materialSampleID |
USP-24-01-134
|
| target_gene |
COI
|
| DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGTGCTTCAGTTGACTTATCAATTTTCTCTTTACATTTAGCGGGTGCTTCGTCAATTTTAGGTGCCATTAATTTTATGTCTACAGTTATTAACATACGAGCTGAAACACTGACATTTGATCGACTTCCATTATTTGTCTGAAGAGTATTTATTACTGTAATTCTTTTACTTTTATCACTTCCAGTACTAGCAGGAGCTATTACTATGTTGCTAACAGATCGAAATCTAAATACCTCATTTTTTGATCCAACAGGAGGTGGAGATCCAATCTTATACCAACATCTATTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KC138445",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211364",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211365",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211375",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus amphitrite",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421137",
"accession": "KM211378",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
2.0
|
|