| Occurrences: |
view occurrences
| id |
bc8e02f8-80d2-415e-825a-61517f2debb9
|
| scientificName |
Botrylloides niger
|
| AphiaID |
252289
|
| eventDate |
2023-05-31
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| eventID |
SUVA1_20230531_WB
|
| materialSampleID |
USP-24-01-123
|
| target_gene |
COI
|
| DNA_sequence |
TTTATCAAGGAATTTAGCTCATTCCGGAGCTGCTTTAGATTGTGCTATTTTCTCCCTTCATTTAGCTAGAGTTTCTAGTATTTTAAGATCTTTAAATTTTATAACCACTTTGTTTAATATAAAAGTAAAAAGGTGGAGGATATTTTCAATATCTTTGTTCTGTTGAACTGTTTTAGTTACGACTATTTTGTTACTTTTATCTTTACCTGTTTTGGCTGCAGCTATTACAATGTTACTTTTCGATCGAAATTTTAACACTTCCTTTTTTGATCCTTCTGGGAGAGGAGATCCGGTTTTGTATCAGCACTTGTTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Botrylloides niger",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:252289",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides nigrum",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215857",
"accession": "KT693198",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides nigrum",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215857",
"accession": "MW278779",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides niger",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:252289",
"accession": "MT637961",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides niger",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:252289",
"accession": "MW817940",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides niger",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:252289",
"accession": "OM912589",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
6.0
|
| id |
2945a2c5-fbaa-430d-958d-a4f41ae9fdee
|
| scientificName |
Botrylloides niger
|
| AphiaID |
252289
|
| eventDate |
2023-05-31
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| eventID |
SUVA1_20230531_WA
|
| materialSampleID |
USP-24-01-122
|
| target_gene |
COI
|
| DNA_sequence |
TTTATCAAGGAATTTAGCTCATTCCGGAGCTGCTTTAGATTGTGCTATTTTCTCCCTTCATTTAGCTAGAGTTTCTAGTATTTTAAGATCTTTAAATTTTATAACCACTTTGTTTAATATAAAAGTAAAAAGGTGGAGGATATTTTCAATATCTTTGTTCTGTTGAACTGTTTTAGTTACGACTATTTTGTTACTTTTATCTTTACCTGTTTTGGCTGCAGCTATTACAATGTTACTTTTCGATCGAAATTTTAACACTTCCTTTTTTGATCCTTCTGGGAGAGGAGATCCGGTTTTGTATCAGCACTTGTTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Botrylloides niger",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:252289",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides nigrum",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215857",
"accession": "KT693198",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides nigrum",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215857",
"accession": "MW278779",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides niger",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:252289",
"accession": "MT637961",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides niger",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:252289",
"accession": "MW817940",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides niger",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:252289",
"accession": "OM912589",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
3.0
|
| id |
c2d75c6e-41b1-4383-aaa5-31be57801485
|
| scientificName |
Botrylloides niger
|
| AphiaID |
252289
|
| eventDate |
2023-05-31
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| eventID |
SUVA1_20230531_WC
|
| materialSampleID |
USP-24-01-124
|
| target_gene |
COI
|
| DNA_sequence |
TTTATCAAGGAATTTAGCTCATTCCGGAGCTGCTTTAGATTGTGCTATTTTCTCCCTTCATTTAGCTAGAGTTTCTAGTATTTTAAGATCTTTAAATTTTATAACCACTTTGTTTAATATAAAAGTAAAAAGGTGGAGGATATTTTCAATATCTTTGTTCTGTTGAACTGTTTTAGTTACGACTATTTTGTTACTTTTATCTTTACCTGTTTTGGCTGCAGCTATTACAATGTTACTTTTCGATCGAAATTTTAACACTTCCTTTTTTGATCCTTCTGGGAGAGGAGATCCGGTTTTGTATCAGCACTTGTTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Botrylloides niger",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:252289",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides nigrum",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215857",
"accession": "KT693198",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides nigrum",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215857",
"accession": "MW278779",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides niger",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:252289",
"accession": "MT637961",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides niger",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:252289",
"accession": "MW817940",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Botrylloides niger",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:252289",
"accession": "OM912589",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
3.0
|
|