Occurrences: |
view occurrences
id |
b144ebdd-9b83-4b95-a991-ff060e42090e
|
scientificName |
Schizoporella pungens
|
AphiaID |
422363
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20230815_S3C
|
materialSampleID |
USP-24-01-155
|
target_gene |
COI
|
DNA_sequence |
ACTGTCATCTAACATTTCACATAGAGGACCATCAGTAGATCTGGCAATTTTTTCACTCCATCTAGCAGGAATTTCATCAATCTTAGGTTCAATTAATTTTATAACAACAATTATTAACATACGAAGAGAGAAAATAGTTATGATACGAACACCTCTATTAGCCTGAGCCATTTTTATCACAGCACTTCTCCTACTTCTTTCATTACCAGTGCTTGCAGGGGCCATTACTATACTTCTAACAGACCGGAATCTTAACACTTCTTTCTTTGACCCAGCCGGAGGTGGAGACCCTATTCTATTCCAACACCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359652",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359653",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359654",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359655",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359656",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
1301.0
|
id |
29e395d4-ae49-439e-8d74-fb68b8e69d37
|
scientificName |
Schizoporella pungens
|
AphiaID |
422363
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20230815_S3A
|
materialSampleID |
USP-24-01-153
|
target_gene |
COI
|
DNA_sequence |
ACTGTCATCTAACATTTCACATAGAGGACCATCAGTAGATCTGGCAATTTTTTCACTCCATCTAGCAGGAATTTCATCAATCTTAGGTTCAATTAATTTTATAACAACAATTATTAACATACGAAGAGAGAAAATAGTTATGATACGAACACCTCTATTAGCCTGAGCCATTTTTATCACAGCACTTCTCCTACTTCTTTCATTACCAGTGCTTGCAGGGGCCATTACTATACTTCTAACAGACCGGAATCTTAACACTTCTTTCTTTGACCCAGCCGGAGGTGGAGACCCTATTCTATTCCAACACCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359652",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359653",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359654",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359655",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359656",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
40.0
|
id |
f0a9efce-5c78-48fc-ac34-bee84d86fcd8
|
scientificName |
Schizoporella pungens
|
AphiaID |
422363
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20230815_S3C
|
materialSampleID |
USP-24-01-155
|
target_gene |
COI
|
DNA_sequence |
TGAGCCATTTTTATCACAGCACTTCTCCTACTTCTTTCATTACCAGTGCTTGCAGGGGCCATTACTATACTTCTAACAGACCGGAATCTTAACACTTCTTTCTTTGACCCAGCCGGAGGTGGAGACCCTATTCTATTCCAACACCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359652",
"identity": 1,
"query_cover": 0.9933
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359653",
"identity": 1,
"query_cover": 0.9933
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359654",
"identity": 1,
"query_cover": 0.9933
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359655",
"identity": 1,
"query_cover": 0.9933
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359656",
"identity": 1,
"query_cover": 0.9933
}
]
}
|
organismQuantity |
7.0
|
id |
aa06ecdb-4c06-48db-9a63-73e073a72c0d
|
scientificName |
Schizoporella pungens
|
AphiaID |
422363
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20230815_S3C
|
materialSampleID |
USP-24-01-155
|
target_gene |
COI
|
DNA_sequence |
ACTGTCATCTAACATTTCACATAGAGGACCATCAGTAGATCTGGCAATTTTTTCACTCCATCTAGCAGGAATTTCATCAATCTTAGGTTCAATTAATTTTATAACAACAATTATTAACATACGAAGAGAGAAAATAGTTATGATACGAACACCTCTATTAGCCTGAGCCATTTTTATCACAGCACTTCTCCTACTTCTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359650",
"identity": 1,
"query_cover": 0.995
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359652",
"identity": 1,
"query_cover": 0.995
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359653",
"identity": 1,
"query_cover": 0.995
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359654",
"identity": 1,
"query_cover": 0.995
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359655",
"identity": 1,
"query_cover": 0.995
}
]
}
|
organismQuantity |
2.0
|
id |
c6172b56-9b86-4d70-ba23-a291a322633b
|
scientificName |
Schizoporella pungens
|
AphiaID |
422363
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20230815_S3C
|
materialSampleID |
USP-24-01-155
|
target_gene |
COI
|
DNA_sequence |
ACTGTCATCTAACATTTCACATAGAGGACCATCAGTAGATCTGGCAATTTTTTCACTCCATCTAGCAGGAATTTCATCAATCTTAGGTTCAATTAATTTTATAACAACAATTATTAACATACGAAGAGAGGAAATAGTTATGATACGAACACCTCTATTAGCCTGAGCCATTTTTATCACAGCACTTCTCCTACTTCTTTCATTACCAGTGCTTGCAGGGGCCATTACTATACTTCTAACAGACCGGAATCTTAACACTTCTTTCTTTGACCCAGCCGGAGGTGGAGACCCTATTCTATTCCAACACCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359652",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359653",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359654",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359655",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359656",
"identity": 0.997,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
11.0
|
id |
b04515de-c690-4271-a7b6-5dc486b8faf2
|
scientificName |
Schizoporella pungens
|
AphiaID |
422363
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20230815_S3C
|
materialSampleID |
USP-24-01-155
|
target_gene |
COI
|
DNA_sequence |
ACTGTCATCTAACATTTCACATAGAGGACCATCAGTAGATCTGGCAATTTTTTCACTCCATCTAGCAGGAATTTCATCAATCTTAGGTTCAATTAATTTTATAACAACAATTATTAACATACGAAGAGAGAAAATAGTTATGATACGAACACCTCTATTAGCCTGAGCCATTTTTATCACAGCACTTCTCCTACTTCTTTCATTACCAGTGCTTGCAGGGGCCATTACTATACTTCTAACAGACCGGAATCTAAACACTTCTTTCTTTGACCCAGCCGGAGGTGGAGACCCTATTCTATTCCAACACCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359652",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359653",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359654",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359655",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359656",
"identity": 0.997,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
5.0
|
id |
477b0ae7-d93d-41a1-99fa-3bed2828f85b
|
scientificName |
Schizoporella pungens
|
AphiaID |
422363
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20230815_S3C
|
materialSampleID |
USP-24-01-155
|
target_gene |
COI
|
DNA_sequence |
ACTGTCATCTAACATTTCACATAGAGGACCATCAGTAGATCTAGCAATTTTTTCACTCCATCTAGCAGGAATTTCATCAATCTTAGGTTCAATTAATTTTATAACAACAATTATTAACATACGAAGAGAGAAAATAGTTATGATACGAACACCTCTATTAGCCTGAGCCATTTTTATCACAGCACTTCTCCTACTTCTTTCATTACCAGTGCTTGCAGGGGCCATTACTATACTTCTAACAGACCGGAATCTTAACACTTCTTTCTTTGACCCAGCCGGAGGTGGAGACCCTATTCTATTCCAACACCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359652",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359653",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359654",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359655",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359656",
"identity": 0.997,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
2.0
|
id |
a67b8725-eeee-48ec-b2a3-28173c707f06
|
scientificName |
Schizoporella pungens
|
AphiaID |
422363
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20230815_S3A
|
materialSampleID |
USP-24-01-153
|
target_gene |
COI
|
DNA_sequence |
ACTGTCATCTAACATTTCACATAGAGGACCATCAGTAGATCTGGCAATTTTTTCACTCCATCTAGCAGGAATTTCATCAATCTTAGGTTCAATTAATTTTATAACAACAATTATTAACATACGAAGAGAGGAAATAGTTATGATACGAACACCTCTATTAGCCTGAGCCATTTTTATCACAGCACTTCTCCTACTTCTTTCATTACCAGTGCTTGCAGGGGCCATTACTATACTTCTAACAGACCGGAATCTTAACACTTCTTTCTTTGACCCAGCCGGAGGTGGAGACCCTATTCTATTCCAACACCTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359652",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359653",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359654",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359655",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Schizoporella pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:422363",
"accession": "MK359656",
"identity": 0.997,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
1.0
|
|