PacMAN decision support system

Potential detection of Metridium senile in Fiji

Description:

Potential detection of Metridium senile with confidence low on 2023-04-27 in material sample USP-24-01-03, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Metridium senile
Cnidaria > Hexacorallia > Actiniaria > Metridiidae
WoRMS: 100982

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

103.0

Names:

Occurrences:

view occurrences

id	2a73716a-453d-40a9-990a-f6f62e952a68
scientificName	Metridium senile
AphiaID	100982
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-03
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGACGGGCCGGCCGGTCCGCCGCAAGGCGTGTTACTGACCGGGCTGTTCTTCTTCGCAAAGACTGCATGTGCTCTTAACTGAGTGTGTGTAGGACTTGTGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Metridium senile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:100982", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Sagartiogeton_undatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:101002", "accession": "FJ489435.1.1754_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Sagartia_elegans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:100991", "accession": "JF832989.1.1817_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Metridium_sp.", "accession": "AF052889.1.1800_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Metridium_senile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:100982", "accession": "JF832988.1.1792_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Sagartia_ornata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:100993", "accession": "JF832985.1.1794_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	103.0

id	ce8ba6eb-1349-41eb-bf2d-788f3cb8552e
scientificName	Metridium senile
AphiaID	100982
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-11
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGACGGGCCGGCCGGTCCGCCGCAAGGCGTGTTACTGACCGGGCTGTTCTTCTTCGCAAAGACTGCATGTGCTCTTAACTGAGTGTGTGTAGGACTTGTGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Metridium senile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:100982", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Sagartiogeton_undatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:101002", "accession": "FJ489435.1.1754_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Sagartia_elegans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:100991", "accession": "JF832989.1.1817_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Metridium_sp.", "accession": "AF052889.1.1800_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Metridium_senile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:100982", "accession": "JF832988.1.1792_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Sagartia_ornata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:100993", "accession": "JF832985.1.1794_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	4.0

id	37f90bf1-cda3-435e-8dc4-b0a113269918
scientificName	Metridium senile
AphiaID	100982
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-01
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGACGGGCCGGCCGGTCCGCCGCAAGGCGTGTTACTGACCGGGCTGTTCTTCTTCGCAAAGACTGCATGTGCTCTTAACTGAGTGTGTGTAGGACTTGTGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Metridium senile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:100982", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Sagartiogeton_undatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:101002", "accession": "FJ489435.1.1754_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Sagartia_elegans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:100991", "accession": "JF832989.1.1817_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Metridium_sp.", "accession": "AF052889.1.1800_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Metridium_senile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:100982", "accession": "JF832988.1.1792_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Sagartia_ornata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:100993", "accession": "JF832985.1.1794_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	2.0

id	88d87e68-1038-4dd8-8782-176a6498e1de
scientificName	Metridium senile
AphiaID	100982
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-05
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGACGGGCCGGCCGGTCCGCCGCAAGGCGTGTTACTGACCGGGCTGTTCTTCTTCGCAAAGACTGCATGTGCTCTTAACTGAGTGTGTGTAGGACTTGTGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Metridium senile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:100982", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Sagartiogeton_undatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:101002", "accession": "FJ489435.1.1754_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Sagartia_elegans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:100991", "accession": "JF832989.1.1817_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Metridium_sp.", "accession": "AF052889.1.1800_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Metridium_senile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:100982", "accession": "JF832988.1.1792_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Sagartia_ornata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:100993", "accession": "JF832985.1.1794_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	2.0

id	afd0d9af-f718-410f-bb66-19c3feba05b5
scientificName	Metridium senile
AphiaID	100982
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-07
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGACGGGCCGGCCGGTCCGCCGCAAGGCGTGTTACTGACCGGGCTGTTCTTCTTCGCAAAGACTGCATGTGCTCTTAACTGAGTGTGTGTAGGACTTGTGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Metridium senile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:100982", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Sagartiogeton_undatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:101002", "accession": "FJ489435.1.1754_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Sagartia_elegans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:100991", "accession": "JF832989.1.1817_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Metridium_sp.", "accession": "AF052889.1.1800_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Metridium_senile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:100982", "accession": "JF832988.1.1792_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Sagartia_ornata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:100993", "accession": "JF832985.1.1794_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	d69a56ab-b78e-41c6-bbe4-0745f687213e
scientificName	Metridium senile
AphiaID	100982
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-06
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGACGGGCCGGCCGGTCCGCCGCAAGGCGTGTTACTGACCGGGCTGTTCTTCTTCGCAAAGACTGCATGTGCTCTTAACTGAGTGTGTGTAGGACTTGTGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Metridium senile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:100982", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Sagartiogeton_undatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:101002", "accession": "FJ489435.1.1754_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Sagartia_elegans", "scientificNameID": "urn:lsid:marinespecies.org:taxname:100991", "accession": "JF832989.1.1817_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Metridium_sp.", "accession": "AF052889.1.1800_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Metridium_senile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:100982", "accession": "JF832988.1.1792_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Sagartia_ornata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:100993", "accession": "JF832985.1.1794_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	1.0

Metridium senile in Fiji

Status

Metridium senile does not have an offial status in Fiji.

Notes

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