Occurrences: |
view occurrences
id |
e6bd50c7-6651-4d13-8ca5-4f0338c5fdeb
|
scientificName |
Canarium mutabile
|
AphiaID |
531880
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20230815_PB
|
materialSampleID |
USP-24-01-145
|
target_gene |
COI
|
DNA_sequence |
TTTAGCAGGAAACTTAGCTCATGCTGGAGGCTCAGTTGATCTAGCTATTTTTTCTCTGCACTTAGCGGGTGTGTCCTCTATTTTAGGTGCGGTAAATTTTATTACTACAATTATTAATATACGATGACGAGGGATGCAATTTGAGCGTCTTCCTCTTTTTGTATGATCGGTAAAAATTACTGCTGTACTTCTATTACTTTCTTTGCCTGTTTTAGCTGGGGCTATTACAATGCTTTTAACAGATCGAAATTTTAATACTGCATTCTTTGATCCTGCTGGAGGGGGGGATCCTATTTTGTACCAACATTTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Canarium mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "DQ525218",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "MN389052",
"identity": 0.981,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
448.0
|
id |
66a4e1e9-524c-4a34-93c1-48a1ad023480
|
scientificName |
Canarium mutabile
|
AphiaID |
531880
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20230815_PB
|
materialSampleID |
USP-24-01-145
|
target_gene |
COI
|
DNA_sequence |
TTTAGCAGGAAACTTAGCTCATGCTGGAGGCTCAGTTGATCTAGCTATTTTTTCTCTGCACTTAGCGGGTGTGTCCTCTATTTTAGGTGCGGTAAATTTTATTACTACAATTATTAATATACGATGACGAGGGATGCAATTTGAGCGTCTTCCTCTTTTTGTATGATCGGTAAAAATTACTGCTGTACTTCTATTACTTTCTTTGCCTGTTCTAGCTGGGGCTATTACAATGCTTTTAACAGATCGAAATTTTAATACTGCATTCTTTGATCCTGCTGGAGGGGGGGATCCTATTTTGTACCAACATTTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Canarium mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "DQ525218",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "MN389052",
"identity": 0.984,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
12.0
|
id |
7329ee07-c364-4b5a-bd12-6efc19ab2fd7
|
scientificName |
Canarium mutabile
|
AphiaID |
531880
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20230815_PB
|
materialSampleID |
USP-24-01-145
|
target_gene |
COI
|
DNA_sequence |
TTTAGCAGGAAACTTAGCTCATGCTGGAGGCTCAGTTGATCTAGCTATTTTTTCTCTGCACTTAGCGGGTGTGTCCTCTATTTTAGGTGCGGTAAATTTTATTACTACAATTATTAATATACGATGACGAGGGATGCAATTTGAGCGTCTTCCTCTTTTTGTATGATCGGTAAAAATTACTGCTGTACTTCTATTACTTTCTTTGCCTGTTTTAGCTGGGGCTATTACAATGCTTTTAACAGATCGAAATTTTAATACTGCATTCTTTGATCCTGCTGGAGGGGGGGATCCTATTTTATACCAACATTTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Canarium mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "DQ525218",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "MN389052",
"identity": 0.978,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
4.0
|
id |
2de64682-2e12-4f08-8a61-6ea5660aef3c
|
scientificName |
Canarium mutabile
|
AphiaID |
531880
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20230815_PB
|
materialSampleID |
USP-24-01-145
|
target_gene |
COI
|
DNA_sequence |
TTTAGCAGGAAACTTAGCTCATGCTGGAGGGTCAGTTGATCTAGCTATTTTTTCTCTGCACTTAGCGGGTGTGTCCTCTATTTTAGGTGCGGTAAATTTTATTACTACAATTATTAATATACGATGACGAGGGATGCAATTTGAACGTCTTCCTCTTTTTGTTTGATCGGTAAAAATTACTGCTGTACTTCTATTACTTTCTTTGCCTGTTCTAGCTGGGGCTATTACAATGCTTTTAACAGATCGAAATTTTAATACTGCATTCTTTGATCCTGCTGGAGGGGGGGATCCTATTTTGTACCAACATTTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Canarium mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "MN389052",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "DQ525218",
"identity": 0.987,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
6.0
|
id |
d31c8f14-46e0-4139-bc15-fa874225e452
|
scientificName |
Canarium mutabile
|
AphiaID |
531880
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20230815_PB
|
materialSampleID |
USP-24-01-145
|
target_gene |
COI
|
DNA_sequence |
TTTAGCAGGAAACTTAGCTCATGCTGGAGGGTCAGTTGATCTAGCTATTTTTTCTCTGCACTTAGCGGGTGTGTCCTCTATTTTAGGTGCGGTAAATTTTATTACTACAATTATTAATATACGATGACGAGGGATGCAATTCGAACGTCTTCCTCTTTTTGTTTGATCGGTAAAAATTACTGCTGTACTTCTATTACTTTCTTTGCCTGTTTTAGCTGGGGCTATTACAATGCTTTTAACAGATCGAAATTTTAATACTGCATTCTTTGATCCTGCTGGAGGGGGGGATCCTATTTTGTACCAACATTTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Canarium mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "MN389052",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "DQ525218",
"identity": 0.987,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
3.0
|
id |
483f9f54-1867-4034-ac5e-f3acad48fe5d
|
scientificName |
Canarium mutabile
|
AphiaID |
531880
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20230815_PB
|
materialSampleID |
USP-24-01-145
|
target_gene |
COI
|
DNA_sequence |
TGATCGGTAAAAATTACTGCTGTACTTCTATTACTTTCTTTGCCTGTTCTAGCTGGGGCTATTACAATGCTTTTAACAGATCGAAATTTTAATACTGCATTCTTTGATCCTGCTGGAGGGGGGGATCCTATTTTGTACCAACATTTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Canarium mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "MN389052",
"identity": 0.993,
"query_cover": 0.9933
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "DQ525218",
"identity": 0.993,
"query_cover": 0.9933
}
]
}
|
organismQuantity |
2.0
|
id |
df7a8d7c-0b18-4cb0-887d-0f2719da65aa
|
scientificName |
Canarium mutabile
|
AphiaID |
531880
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20230815_PB
|
materialSampleID |
USP-24-01-145
|
target_gene |
COI
|
DNA_sequence |
TTTAGCAGGAAACTTAGCTCATGCTGGAGGGTCAGTTGATCTAGCTATTTTTTCTCTGCACTTAGCGGGTGTGTCCTCTATTTTAGGTGCGGTAAATTTTATTACTACAATTATTAATATACGATGACGAGGGATGCAATTTGAACGTCTTCCTCTTTTTGTTTGATCGGTAAAAATTACTGCTGTACTTCTATTACTTTCTTTGCCTGTTTTAGCTGGGGCTATTACAATGCTTTTAACAGATCGAAATTTTAATACTGCATTCTTTGATCCTGCTGGAGGGGGGGATCCTATTTTGTACCAACATTTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Canarium mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "MN389052",
"identity": 0.99,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "DQ525218",
"identity": 0.99,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
264.0
|
id |
758f6a12-c965-48b0-855f-e941bbb85d15
|
scientificName |
Canarium mutabile
|
AphiaID |
531880
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20230815_S3C
|
materialSampleID |
USP-24-01-155
|
target_gene |
COI
|
DNA_sequence |
TTTAGCAGGAAACTTAGCTCATGCTGGAGGGTCAGTTGATCTAGCTATTTTTTCTCTGCACTTAGCGGGTGTGTCTTCTATTTTAGGTGCGGTAAATTTTATTACTACAATTATTAATATACGATGACGAGGGATGCAATTCGAACGTCTTCCTCTTTTTGTCTGATCGGTAAAAATTACTGCTGTACTTCTATTACTTTCTTTGCCTGTTCTAGCTGGGGCTATTACAATGCTTTTAACAGATCGAAATTTTAATACTGCATTCTTTGATCCTGCTGGAGGGGGGGATCCTATTTTGTACCAACATTTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Canarium mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "MN389052",
"identity": 0.99,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "DQ525218",
"identity": 0.98,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
4.0
|
id |
a52e14e7-fced-4e5c-b4be-f344beeadabf
|
scientificName |
Canarium mutabile
|
AphiaID |
531880
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20230815_S3A
|
materialSampleID |
USP-24-01-153
|
target_gene |
COI
|
DNA_sequence |
TTTAGCAGGAAACTTAGCTCATGCTGGAGGGTCAGTTGATCTAGCTATTTTTTCTCTGCACTTAGCGGGTGTGTCCTCTATTTTAGGTGCGGTAAATTTTATTACTACAATTATTAATATACGATGACGAGGGATGCAATTTGAACGTCTTCCTCTTTTTGTCTGATCGGTAAAAATTACTGCTGTACTTCTATTACTTTCTTTGCCTGTTCTAGCTGGGGCTATTACAATGCTTTTAACAGATCGAAATTTTAATACTGCATTCTTTGATCCTGCTGGAGGGGGGGATCCTATTTTGTACCAACATTTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Canarium mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "MN389052",
"identity": 0.99,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "DQ525218",
"identity": 0.987,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
4.0
|
id |
656bad78-e989-4fe7-bc73-afd913dd5dff
|
scientificName |
Canarium mutabile
|
AphiaID |
531880
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20230815_PB
|
materialSampleID |
USP-24-01-145
|
target_gene |
COI
|
DNA_sequence |
TTTAGCAGGAAACTTAGCTCATGCTGGAGGGTCAGTTGATCTAGCTATTTTTTCTCTGCACTTAGCGGGTGTGTCCTCTATTTTAGGTGCGGTAAATTTTATTACTACAATTATTAATATACGATGACGAGGGATGCAATTTGAACGTCTTCCTCTTTTTGTCTGATCGGTAAAAATTACTGCTGTACTTCTATTACTTTCTTTGCCTGTTTTAGCTGGGGCTATTACAATGCTTTTAACAGATCGAAATTTTAATACTGCATTCTTTGATCCTGCTGGAGGGGGGGATCCTATTTTGTACCAACATTTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Canarium mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "DQ525218",
"identity": 0.99,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "MN389052",
"identity": 0.987,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
3.0
|
id |
4bd6aead-0891-4e7f-b81d-942f4cb56fad
|
scientificName |
Canarium mutabile
|
AphiaID |
531880
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20230815_PB
|
materialSampleID |
USP-24-01-145
|
target_gene |
COI
|
DNA_sequence |
TTTAGCAGGAAACTTAGCTCATGCTGGAGGGTCAGTTGATCTAGCTATTTTTTCTCTGCACTTAGCGGGTGTGTCCTCTATTTTAGGTGCGGTAAATTTTATTACTACAATTATTAATATACGATGACGAGGGATGCAATTTGAACGTCTTCCTCTTTTTGTCTGATCGGTAAAAATTACTGCTGTACTTCTATTACTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Canarium mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "MN389052",
"identity": 0.99,
"query_cover": 0.995
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "DQ525218",
"identity": 0.985,
"query_cover": 0.995
}
]
}
|
organismQuantity |
1.0
|
id |
f8c279ad-c09e-4c3a-bc4c-2b08b311bf3e
|
scientificName |
Canarium mutabile
|
AphiaID |
531880
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20230815_PC
|
materialSampleID |
USP-24-01-146
|
target_gene |
COI
|
DNA_sequence |
TTTAGCAGGGAACTTAGCTCATGCTGGAGGGTCAGTTGATCTAGCTATTTTTTCTCTACACTTAGCCGGTGTATCCTCTATTTTAGGTGCGGTAAATTTTATTACTACAATTATTAATATACGATGACGAGGTATGCAATTTGAACGTCTTCCTCTTTTTGTTTGATCAGTAAAAATTACTGCTGTACTCCTATTACTTTCTTTGCCTGTTCTAGCTGGGGCTATTACAATGCTTTTAACAGATCGAAATTTTAATACTGCATTCTTTGGCCCTGCTGGAGGGGGGGATCCTATTTTATATCAACATTTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Canarium mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"confidence": 0.96
}
]
}
|
organismQuantity |
47.0
|
id |
565b1f2c-a3bc-4ebf-ab98-dda8eb34233a
|
scientificName |
Canarium mutabile
|
AphiaID |
531880
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20230815_S3A
|
materialSampleID |
USP-24-01-153
|
target_gene |
COI
|
DNA_sequence |
TTTAGCAGGAAACTTAGCTCATGCTGGAGGGTCAGTTGATCTAGCTATTTTTTCTCTGCACTTAGCGGGTGTGTCTTCTATTTTAGGTGCGGTAAATTTTATCACTACAATTATTAATATACGATGACGAGGGATGCAATTCGAACGTCTTCCTCTCTTTGTCTGATCGGTAAAAATTACTGCTGTACTTCTATTACTTTCTTTGCCTGTTCTAGCTGGGGCTATTACAATGCTTTTAACAGATCGAAATTTTAATACTGCATTCTTTGATCCTGCTGGAGGGGGGGATCCTATTTTGTACCAACATTTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Canarium mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "MN389052",
"identity": 0.984,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "DQ525218",
"identity": 0.974,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
1.0
|
id |
81af1dc2-fbce-4837-9cc4-bc957cd9a6cc
|
scientificName |
Canarium mutabile
|
AphiaID |
531880
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20230815_S2C
|
materialSampleID |
USP-24-01-152
|
target_gene |
COI
|
DNA_sequence |
TTTAGCAGGAAACTTAGCTCATGCTGGAGGGTCAGTTGATCTAGCTATTTTTTCTCTGCACTTAGCGGGTGTGTCCTCTATTTTAGGTGCGGTAAATTTTATTACTACAATTATTAATATACGATGACGAGGGATGCAATTTGAACGTCTTCCTCTTTTTGTCTGATCGGTAAAAATTACTGCTGTACTTCTATTACTTTCTTTGCCTGTTCTAGCTGGGGCTATTACAATGCTTTTAACAGATCGAAATTTTAATACTGCATTCTTTGATCCTGCTGGAGGGGGAGATCCTATTTTGTATCAACATTTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Canarium mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "MN389052",
"identity": 0.984,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Canarium_mutabile",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:531880",
"accession": "DQ525218",
"identity": 0.98,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
1.0
|
|