PacMAN decision support system

Potential detection of Hydroides minax in Fiji

Description:

Potential detection of Hydroides minax with confidence low on 2022-10-03 in material sample S81, marker 18S

Confidence:

low

Risk:

medium view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Hydroides minax
Annelida > Polychaeta > Sabellida > Serpulidae
WoRMS: 131007

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

467.0

Names:

4

Occurrences:

view occurrences

id	526194b8-9ff5-4307-b6f0-df5ec43e86c5
scientificName	Serpula vermicularis
AphiaID	131051
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S81
target_gene	18S
DNA_sequence	CCGTTGGTCTCTGTGACTGGTGTAATGATTAAGAGGGACTGCCGGGGGCATTGGTATGGCGGGGTTAGAGGTGAAATTCTTGGATCCTCGCCAGACCAACAAAAGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Serpula vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Serpula_columbiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:338088", "accession": "DQ317127.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "AY395721.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "DQ140409.1.1708_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	467.0

id	2e1cedfd-07ca-4c73-ae85-637d8f534e8a
scientificName	Serpula vermicularis
AphiaID	131051
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S80
target_gene	18S
DNA_sequence	CCGTTGGTCTCTGTGACTGGTGTAATGATTAAGAGGGACTGCCGGGGGCATTGGTATGGCGGGGTTAGAGGTGAAATTCTTGGATCCTCGCCAGACCAACAAAAGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Serpula vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Serpula_columbiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:338088", "accession": "DQ317127.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "AY395721.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "DQ140409.1.1708_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	108.0

id	e0d33cc3-9864-4aa9-86e5-6f50fc910776
scientificName	Serpula vermicularis
AphiaID	131051
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S87
target_gene	18S
DNA_sequence	CCGTTGGTCTCTGTGACTGGTGTAATGATTAAGAGGGACTGCCGGGGGCATTGGTATGGCGGGGTTAGAGGTGAAATTCTTGGATCCTCGCCAGACCAACAAAAGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Serpula vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Serpula_columbiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:338088", "accession": "DQ317127.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "AY395721.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "DQ140409.1.1708_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	15.0

id	d57cb856-ca8f-4ac8-a313-77746d70efc4
scientificName	Serpula vermicularis
AphiaID	131051
eventDate	2022-10-03
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S77
target_gene	18S
DNA_sequence	CCGTTGGTCTCTGTGACTGGTGTAATGATTAAGAGGGACTGCCGGGGGCATTGGTATGGCGGGGTTAGAGGTGAAATTCTTGGATCCTCGCCAGACCAACAAAAGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Serpula vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Serpula_columbiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:338088", "accession": "DQ317127.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "AY395721.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "DQ140409.1.1708_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	3.0

id	57d63c7e-6154-4f53-94b5-091f9d5c6bd8
scientificName	Hydroides
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S80
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTATCGTCTCGGTGGTCCTGTTCACGCAGGCACTGCCTTGATGACCTAACCGATGGTTGAACGACTCCGAGTGCCCTTCACTGGGTGCTCGTGGGTGGCCATCGCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Hydroides", "scientificNameID": "urn:lsid:marinespecies.org:taxname:129566", "confidence": 0.83 }, { "method": "VSEARCH", "scientificName": "Hydroides_ezoensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131003", "accession": "EU184062.1.1745_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_trivesiculosus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328477", "accession": "EU184060.1.1723_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_sanctaecrucis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:333645", "accession": "EU184061.1.1774_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	97.0

id	5101ae4d-ab47-46f8-9265-6b5cd47d9685
scientificName	Hydroides
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S81
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTATCGTCTCGGTGGTCCTGTTCACGCAGGCACTGCCTTGATGACCTAACCGATGGTTGAACGACTCCGAGTGCCCTTCACTGGGTGCTCGTGGGTGGCCATCGCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Hydroides", "scientificNameID": "urn:lsid:marinespecies.org:taxname:129566", "confidence": 0.83 }, { "method": "VSEARCH", "scientificName": "Hydroides_ezoensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131003", "accession": "EU184062.1.1745_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_trivesiculosus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328477", "accession": "EU184060.1.1723_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_sanctaecrucis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:333645", "accession": "EU184061.1.1774_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	57.0

Hydroides minax in Fiji

Status

Hydroides minax does not have an offial status in Fiji.

Notes

No notes found.