| Occurrences: |
view occurrences
| id |
2ed784d3-af74-4298-acdd-204b3ebb7684
|
| scientificName |
Styela plicata
|
| AphiaID |
103936
|
| eventDate |
2023-08-15
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| materialSampleID |
USP-24-01-59
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGGATTTTGGGCGGTTGAAAAGCTCGTAGTTGGATTTTGGGCGTAGTTGGATTTTGGGCGGGCGGTTTTCGGAGCACGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Styela plicata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103936",
"confidence": 0.96
}
]
}
|
| organismQuantity |
129.0
|
| id |
6ac5e315-3b2f-4ffb-88f4-18f0d3a73ee3
|
| scientificName |
Styela plicata
|
| AphiaID |
103936
|
| eventDate |
2023-08-15
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| materialSampleID |
USP-24-01-59
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGGATTTTGGGCGGTTGAAAAGCTCGTAGTTGGATTTTGGGCGTAGTTGGATTTTGGGCGGGCGGTTTTCGGAGCACGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Styela plicata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103936",
"confidence": 0.95
}
]
}
|
| organismQuantity |
117.0
|
| id |
c18f4549-0baf-473e-a0ce-229601c1daf0
|
| scientificName |
Styela plicata
|
| AphiaID |
103936
|
| eventDate |
2023-08-15
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| materialSampleID |
USP-24-01-59
|
| target_gene |
18S
|
| DNA_sequence |
AGGGCGAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAACAGTGTATGCTAAAGTTGGATTTTGGGCGGTTGAAAAGCTCGTAGTTGGATTTTGGGCGTAGCTGGATTTTGGGCGGGCGGTTTTCGGAGCACGAGGTAATGATTAAGAGGGACAGACGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGAACTACTGCGAAAGCATTCGCCAAGAATGTTTTCTTTAATCAAGAGCGAAAGTCAGAGGTTCG
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Styela plicata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103936",
"confidence": 0.96
}
]
}
|
| organismQuantity |
4.0
|
|