PacMAN decision support system

Potential detection of Chaetoceros decipiens in Fiji

Description:

Potential detection of Chaetoceros decipiens with confidence low on 2022-05-25 in material sample S47, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Chaetoceros decipiens
Heterokontophyta > Bacillariophyceae > Chaetocerotanae incertae sedis > Chaetocerotaceae
WoRMS: 149126

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

32.0

Names:

4

Occurrences:

view occurrences

id	48933fd1-e5d1-4dfb-87ab-9d83037f0b53
scientificName	Chaetoceros
eventDate	2022-05-25
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S47
target_gene	18S
DNA_sequence	TTTGTTGGTTTGCGCACCGTGGTAATGATGAATAGGGACAGTTGTGGGTATTCGTATTCACTTGTAAGAGGTGAAATTCTTAGATTAAGGGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTCATTAATCAAGAACGAAAGTGTGGGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Chaetoceros", "scientificNameID": "urn:lsid:marinespecies.org:taxname:148985", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "accession": "DQ455710.1.1310_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros mitra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:148986", "accession": "KX611427.1.1596_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611428.1.1564_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611429.1.1461_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611430.1.1512_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	32.0

id	335ae07b-84e9-465d-87b5-5d6dac5aaa91
scientificName	Chaetoceros
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S46
target_gene	18S
DNA_sequence	TTTGTTGGTTTGCGCACCGTGGTAATGATGAATAGGGACAGTTGTGGGTATTCGTATTCACTTGTAAGAGGTGAAATTCTTAGATTAAGGGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTCATTAATCAAGAACGAAAGTGTGGGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Chaetoceros", "scientificNameID": "urn:lsid:marinespecies.org:taxname:148985", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "accession": "DQ455710.1.1310_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros mitra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:148986", "accession": "KX611427.1.1596_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611428.1.1564_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611429.1.1461_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611430.1.1512_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	25.0

id	870878a9-fe69-4c6c-a54e-fee8d1f96bec
scientificName	Chaetoceros
eventDate	2022-05-25
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S48
target_gene	18S
DNA_sequence	TTTGTTGGTTTGCGCACCGTGGTAATGATGAATAGGGACAGTTGTGGGTATTCGTATTCACTTGTAAGAGGTGAAATTCTTAGATTAAGGGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTCATTAATCAAGAACGAAAGTGTGGGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Chaetoceros", "scientificNameID": "urn:lsid:marinespecies.org:taxname:148985", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "accession": "DQ455710.1.1310_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros mitra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:148986", "accession": "KX611427.1.1596_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611428.1.1564_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611429.1.1461_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611430.1.1512_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	10.0

id	ee83e59e-31fd-4ba5-82ba-2c932a792ff7
scientificName	Chaetoceros
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S45
target_gene	18S
DNA_sequence	TTTGTTGGTTTGCGCACCGTGGTAATGATGAATAGGGACAGTTGTGGGTATTCGTATTCACTTGTAAGAGGTGAAATTCTTAGATTAAGGGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTCATTAATCAAGAACGAAAGTGTGGGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Chaetoceros", "scientificNameID": "urn:lsid:marinespecies.org:taxname:148985", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "accession": "DQ455710.1.1310_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros mitra", "scientificNameID": "urn:lsid:marinespecies.org:taxname:148986", "accession": "KX611427.1.1596_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611428.1.1564_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611429.1.1461_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Chaetoceros laevisporus", "accession": "KX611430.1.1512_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	8.0

id	8da8f6b2-9fa3-44d1-9b10-36edd53eb6d2
scientificName	Chaetoceros decipiens
AphiaID	149126
eventDate	2022-05-25
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S47
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTTAGTTGTTGCAGTTAAAAAGCTCGTAGTTGAATTTCTGGTGGGAGAATGCAGTCCAACCTTAGGGTTGGTACTCGCACTCTCCGGCCATCCTTGGGTGGAGCCTGTCTGGCATTAAGTTGTCGGGCAGGGGATACCCATCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "accession": "DQ455710.1.1310_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	25.0

id	5b513038-7ff0-4c48-bf60-89e81f1d0826
scientificName	Chaetoceros decipiens
AphiaID	149126
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S46
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTTAGTTGTTGCAGTTAAAAAGCTCGTAGTTGAATTTCTGGTGGGAGAATGCAGTCCAACCTTAGGGTTGGTACTCGCACTCTCCGGCCATCCTTGGGTGGAGCCTGTCTGGCATTAAGTTGTCGGGCAGGGGATACCCATCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "accession": "DQ455710.1.1310_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	24.0

id	f5914d5a-4b4a-4063-a918-5b7f0615b0f5
scientificName	Chaetoceros decipiens
AphiaID	149126
eventDate	2022-05-25
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S48
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTTAGTTGTTGCAGTTAAAAAGCTCGTAGTTGAATTTCTGGTGGGAGAATGCAGTCCAACCTTAGGGTTGGTACTCGCACTCTCCGGCCATCCTTGGGTGGAGCCTGTCTGGCATTAAGTTGTCGGGCAGGGGATACCCATCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "accession": "DQ455710.1.1310_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	8.0

id	dc2c4a57-80df-4b3c-a6fa-1707cf5eba44
scientificName	Chaetoceros decipiens
AphiaID	149126
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S45
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTTAGTTGTTGCAGTTAAAAAGCTCGTAGTTGAATTTCTGGTGGGAGAATGCAGTCCAACCTTAGGGTTGGTACTCGCACTCTCCGGCCATCCTTGGGTGGAGCCTGTCTGGCATTAAGTTGTCGGGCAGGGGATACCCATCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "confidence": 0.96 }, { "method": "VSEARCH", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "accession": "DQ455710.1.1310_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	6.0

id	94d239a7-f9b2-4339-ba1c-0f258d687565
scientificName	Chaetoceros decipiens
AphiaID	149126
eventDate	2022-05-25
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S47
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGAATTTCTGGTGGGAGAATGCAGTCCAACCTTAGGGTTGGTACTCGCACTCTCCGGCCATCCTTGGGTGGAGCCTGTCTGGCATTAAGTTGTCGGGCAGGGGATACCCATCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "confidence": 0.88 }, { "method": "VSEARCH", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "accession": "DQ455710.1.1310_U", "identity": 0.986, "query_cover": 0.9952 } ] }
organismQuantity	2.0

id	a11e1345-5f74-434b-aaf5-435f5de7bb4b
scientificName	Chaetoceros decipiens
AphiaID	149126
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S45
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGAATTTCTGGTGGGAGAATGCAGTCCAACCTTAGGGTTGGTACTCGCACTCTCCGGCCATCCTTGGGTGGAGCCTGTCTGGCATTAAGTTGTCGGGCAGGGGATACCCATCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "confidence": 0.88 }, { "method": "VSEARCH", "scientificName": "Chaetoceros decipiens", "scientificNameID": "urn:lsid:marinespecies.org:taxname:149126", "accession": "DQ455710.1.1310_U", "identity": 0.986, "query_cover": 0.9952 } ] }
organismQuantity	1.0

Chaetoceros decipiens in Fiji

Status

Chaetoceros decipiens does not have an offial status in Fiji.

Notes

No notes found.