Occurrences: |
view occurrences
id |
fdb61e5b-115c-493f-bc49-e15b654070f4
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-06-20
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S158
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGCATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTTTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.977,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.977,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
3897.0
|
id |
438af3ae-5e04-431b-b1a4-7e2f0c3253cb
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-06-20
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S158
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGCATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTCTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTCCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.977,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.977,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
1534.0
|
id |
9e9aa6e2-4582-44fd-819c-28d3e12c254d
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-06-20
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S151
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGCATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATCTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTCTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.977,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.977,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
231.0
|
id |
53564d2d-4101-4b35-abc9-9cca64bb8f89
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-06-20
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S158
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGTATGGACTTGGCTATTTTGAGGCTTCACTTAGCTGGTATTAGATCAATTTTTAGATCAATTAACTTCATGGTAACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACCTCATTTTTATTACTTACGACTCTTCCAGTATTGGCTGGTGGGCTGACTATGTTACTGACGGATCGACATTTTAATACTTCTTTCTTTGATCCGGTAGGGGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
}
]
}
|
organismQuantity |
163.0
|
id |
341072ac-23cd-4edf-824b-5540873bf6b3
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-06-20
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S158
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGCATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTCTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.98,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.98,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
116.0
|
id |
ba76a67a-9992-4812-b24d-4bfa0d39c4aa
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-06-20
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S158
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGCATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATCTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTTTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.974,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.974,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
58.0
|
id |
86e95a40-4b7e-4e9f-a6c3-19a35f215839
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-06-20
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S158
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGCATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATCTTTAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTCTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.977,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.977,
"query_cover": 0.9967
}
]
}
|
organismQuantity |
5.0
|
id |
e3da890e-a68c-47f6-9958-98a36c139bc5
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-06-20
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S158
|
target_gene |
COI
|
DNA_sequence |
TGATCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTATTGGCTGGTGGGTTGACTATGTTACTGACGGACCGACATTTTAATACTTCTTTCTTCGATCCGGTAGGAGGTGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 0.99
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.973,
"query_cover": 0.9933
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.973,
"query_cover": 0.9933
}
]
}
|
organismQuantity |
5.0
|
id |
d2cf237e-1417-421d-8790-99eb6971c01d
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-06-20
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S151
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGTATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTCAGGTCAATTAACTTTATGGTGACAATTACTAACATACGATCAGTAGATGGCCATTTACTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTACTACTTACCACTCTTCCAGTGCTGGCTGGTGGGTTGACTATGTTGCTGACGGATCGACATTTCAATACTTCTTTCTTTGATCCGGTAGGAGGCGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
}
]
}
|
organismQuantity |
3.0
|
id |
f338e334-c2ba-43a4-99cc-c89a87270ae8
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-06-20
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S158
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGTATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTCAGGTCAATTAACTTTATGGTGACAATTACTAACATACGATCAGTAGATGGCCATTTACTGGCTTTGTTTCCTTGATCTATTAAAGTGACTTCATTTTTACTACTTACCACTCTTCCAGTGCTGGCTGGTGGGTTGACTATGTTGCTGACGGATCGACATTTCAATACTTCTTTCTTTGATCCGGTAGGAGGCGGTGATCCGGTCTTATTTCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
}
]
}
|
organismQuantity |
2.0
|
id |
33dbcf55-521c-4d59-86be-d1deef0d8116
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-06-20
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
materialSampleID |
S158
|
target_gene |
COI
|
DNA_sequence |
TTTATCTACTTTCTCATATCATGGAATGTGTATGGACTTGGCTATTTTGAGACTTCACTTAGCTGGTATTAGATCAATTTTCAGGTCAATTAACTTTATGGTGACAATTACTAATATACGATCAGTAGATGGCCATTTATTGGCTTTGTTTCCTTGGTCTATTAAAGTGACTTCATTCTTATTACTTACCACTCTTCCAG
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683510",
"identity": 0.99,
"query_cover": 0.995
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"accession": "KC683511",
"identity": 0.99,
"query_cover": 0.995
},
{
"method": "VSEARCH",
"scientificName": "Dendostrea sandvichensis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:506713",
"accession": "MN608290",
"identity": 0.985,
"query_cover": 0.995
}
]
}
|
organismQuantity |
1.0
|
id |
d10e5ef3-eacc-4397-b18e-7412e471db49
|
scientificName |
Dendostrea sandvichensis
|
AphiaID |
506713
|
eventDate |
2022-06-20
|
decimalLongitude |
178.4255
|
decimalLatitude |
-18.13163
|
materialSampleID |
S149
|
target_gene |
COI
|
DNA_sequence |
TTTGTCTACTTTCTCATATCACGGAATGTGCATGGATTTGGCCATTTTAAGACTTCATTTAGCCGGAATTAGATCAATTTTTAGGTCAATTAACTTTGTAGTAACAATTACTAATATACGGTCAGTAGATGGCCACTTGTTAGCTTTATTTCCTTGGTCTATTAAAGTGACTTCATTTTTATTACTTACCACTCTTCCAGTCTTAGCTGGTGGGTTAACTATGTTACTGACAGATCGACATTTTAACACTTCTTTCTTTGACCCAGTAGGGGGTGGTGATCCGGTTTTATTCCAGCATTTATTC
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Dendostrea crenulifera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:244714",
"confidence": 0.81
}
]
}
|
organismQuantity |
1.0
|
|