PacMAN decision support system

Potential detection of Diplosoma simile in Fiji

Description:

Potential detection of Diplosoma simile with confidence low on 2023-08-24 in material sample USP-24-01-65, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Diplosoma simile
Chordata > Ascidiacea > Aplousobranchia > Didemnidae
WoRMS: 250415

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

359.0

Names:

5

Occurrences:

view occurrences

id	ea0a078b-1cc8-4d56-9557-bc40fad1bdf8
scientificName	Diplosoma
eventDate	2023-08-24
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-65
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	359.0

id	979fdc5a-2648-447f-94ea-0bb418780200
scientificName	Diplosoma
eventDate	2023-08-24
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-33
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	137.0

id	91cf8020-170c-4ac7-9a11-d56cbb8e9fd3
scientificName	Diplosoma
eventDate	2023-08-24
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-34
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	58.0

id	6ef735b1-a085-40a9-a19b-4ad8f395caa4
scientificName	Diplosoma
eventDate	2023-08-24
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-64
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	42.0

id	7bedccaa-587a-47a2-8363-6e32d3bb97aa
scientificName	Diplosoma
eventDate	2023-08-24
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-32
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	15.0

id	3508f857-3fcf-48b9-922b-7d9c3cbe4f5b
scientificName	Diplosoma
eventDate	2023-08-24
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-30
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	4.0

id	a02f9a01-ccc6-4ea2-80d0-22d50dd588dd
scientificName	Diplosoma
eventDate	2023-08-24
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-31
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	3.0

id	dc3fd341-bcdd-4dae-bf10-88b358da2126
scientificName	Diplosoma
eventDate	2023-08-24
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-29
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	3.0

Diplosoma simile in Fiji

Status

Diplosoma simile does not have an offial status in Fiji.

Notes

No notes found.