| Occurrences: |
view occurrences
| id |
e41c541f-6236-4d4e-b328-551dd0c4d1d7
|
| scientificName |
Halisarca dujardinii
|
| AphiaID |
132736
|
| eventDate |
2022-05-25
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
S138
|
| target_gene |
COI
|
| DNA_sequence |
TTTGGCGGGTATACAGACACATTCCGGGGGGTCTGTGGATATGGCCATATTTAGCTTACACTTGGCGGGTATATCTTCGATTTTAAGCTCCATGAATTTTATAACAACGATTATTAATATGAGGGCGCCGGGTATGACTATGGATCGGCTTCCATTATTTGTATGGTCAATTTTAATCACAACAATCTTATTACTATTGTCTTTGCCGGTTTTAGCTGGTGCGATTACAATGCTTTTAACGGATCGGAATTTTAATACGACTTTTTTTGACCCGGCTGGGGGTGGTGATCCTATTTTATATCAGCATCTTTTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Halisarca dujardinii",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:132736",
"confidence": 0.89
},
{
"method": "VSEARCH",
"scientificName": "Halisarca desqueyrouxae",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:932306",
"accession": "KY564211",
"identity": 0.987,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Halisarca dujardinii",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:132736",
"accession": "MG421851",
"identity": 0.978,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
314.0
|
| id |
35c5614c-90ee-4af3-a675-b8aa72fcdd53
|
| scientificName |
Halisarca dujardinii
|
| AphiaID |
132736
|
| eventDate |
2022-05-25
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
S138
|
| target_gene |
COI
|
| DNA_sequence |
TTTGGCGGGTATACAGACACATTCCGGGGGGTCTGTGGATATGGCCATATTTAGCTTACACTTGGCGGGTATATCTTCGATTTTAAGCTCCATGAATTTTATAACAACGATTATTAATATGAGGGCGCCGGGTATGACTATGGATCGGCTTCCATTATTTGTATGGTCAATTTTAATCACAACAATCTTATTACTATTGTCTTTGCCGGTTTTAGCTGGTGCGATTACAATGCTTTTAACGGATCGGAATTTTAATACGACTTTTTTTGACCCGGCTGGGGGTGGTGACCCGATTTTATATCAGCATCTTTTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Halisarca dujardinii",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:132736",
"confidence": 0.95
},
{
"method": "VSEARCH",
"scientificName": "Halisarca desqueyrouxae",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:932306",
"accession": "KY564211",
"identity": 0.981,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Halisarca dujardinii",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:132736",
"accession": "MG421851",
"identity": 0.978,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
1.0
|
| id |
3e8c12a4-75d9-4bb4-bd03-8b227482a713
|
| scientificName |
Halisarca dujardinii
|
| AphiaID |
132736
|
| eventDate |
2022-05-25
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
S138
|
| target_gene |
COI
|
| DNA_sequence |
TTTGGCGGGTATACAGACACATTCCGGGGGGTCTGTGGATATGGCCATATTTAGCTTACACTTGGCGGGTATATCTTCGATTTTAAGCTCCATGAATTTTATAACAACGATTATTAATATGAGGGCGCCGGGTATGACTATGGATCGGCTTCCATTATTTGTATGGTCAATTTTAATCACAACAATCTTATTACTATTGTCTTTGCCGGTTTTAGCTGGTGCGATTACAATGCTTTTAACTGATCGGAATTTTAATACGACTTTTTTTGACCCGGCTGGGGGTGGTGATCCGATTTTATATCAGCATCTTTTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Halisarca dujardinii",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:132736",
"confidence": 0.98
},
{
"method": "VSEARCH",
"scientificName": "Halisarca desqueyrouxae",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:932306",
"accession": "KY564211",
"identity": 0.981,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Halisarca dujardinii",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:132736",
"accession": "MG421851",
"identity": 0.978,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
1.0
|
|