identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Malleus regula",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:605717",
"confidence": 0.98
},
{
"method": "VSEARCH",
"scientificName": "Malleus regula",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:605717",
"accession": "AB594372.1.1734_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Malleus regula",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:605717",
"accession": "HQ329354.1.1775_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Malleus albus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:507057",
"accession": "HQ329357.1.1775_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Malleus irregularis",
"accession": "AB594375.1.1734_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Malleus albus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:507057",
"accession": "HQ329356.1.1775_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|