| Occurrences: |
view occurrences
| id |
35f5c17d-f7ef-4838-ab8f-8b44b518ac60
|
| scientificName |
Bugula neritina
|
| AphiaID |
111158
|
| eventDate |
2023-08-24
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| eventID |
SUVA1_20230824_WB
|
| materialSampleID |
USP-24-01-126
|
| target_gene |
COI
|
| DNA_sequence |
TTATCATCGGGCTTAGGTCACAGAGGAGCAGCTGTGGATTTAGCCATTTTCTCTTTACACCTTGCCGGTGTATCCTCAATTTTAGGAGCAATTAACTTTATTACTACAACAATTAATATACGAAGAAACTCTATAAAAATAATTCAAATCCCTTTATTTATTTGGGCAGTTTTTATTACAGCCATTTTGTTACTTTTATCTTTACCAGTGCTAGCTGGAGCTATTACTATACTACTAACCGATCGTAATGTTAATACATCTTTTTTTGACCCTGCTGGAGGGGGGGATCCTATTTTATACCAACACTTATTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Bugula neritina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111158",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Bugula neritina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111158",
"accession": "KC129735",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Bugula neritina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111158",
"accession": "KC129736",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Bugula neritina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111158",
"accession": "KC129737",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Bugula neritina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111158",
"accession": "KC129738",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Bugula neritina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111158",
"accession": "KC129739",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
3.0
|
| id |
d6fb183a-c22c-42cc-a740-d3309bd85b4b
|
| scientificName |
Bugula neritina
|
| AphiaID |
111158
|
| eventDate |
2023-08-24
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| eventID |
SUVA1_20230824_WC
|
| materialSampleID |
USP-24-01-127
|
| target_gene |
COI
|
| DNA_sequence |
TTATCATCGGGCTTAGGTCACAGAGGAGCAGCTGTGGATTTAGCCATTTTCTCTTTACACCTTGCCGGTGTATCCTCAATTTTAGGAGCAATTAACTTTATTACTACAACAATTAATATACGAAGAAACTCTATAAAAATAATTCAAATCCCTTTATTTATTTGGGCAGTTTTTATTACAGCCATTTTGTTACTTTTATCTTTACCAGTGCTAGCTGGAGCTATTACTATACTACTAACCGATCGTAATGTTAATACATCTTTTTTTGACCCTGCTGGAGGGGGGGATCCTATTTTATACCAACACTTATTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Bugula neritina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111158",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Bugula neritina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111158",
"accession": "KC129735",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Bugula neritina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111158",
"accession": "KC129736",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Bugula neritina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111158",
"accession": "KC129737",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Bugula neritina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111158",
"accession": "KC129738",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Bugula neritina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111158",
"accession": "KC129739",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
3.0
|
|