PacMAN decision support system

Potential detection of Amathia verticillata in Fiji

Description:

Potential detection of Amathia verticillata with confidence low on 2022-10-03 in material sample S74, marker 18S

Confidence:

low

Risk:

medium view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Amathia verticillata
Bryozoa > Gymnolaemata > Ctenostomatida > Vesiculariidae
WoRMS: 851581

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

20.0

Names:

Occurrences:

view occurrences

id	cc6e72b2-0be8-42e1-bdc7-5b99af2b2e7c
scientificName	Amathia imbricata
AphiaID	851593
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S74
target_gene	18S
DNA_sequence	GCTGGTTTTAGAGTCGGCGAGCCAATGATTAATAGGGACTGCCGGGGGCATTCGTACTCGGACGGGAGAGGTGAAATTCAAGGATCGTCCGAAGACGCCCGACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTGCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Bowerbankia imbricata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111667", "confidence": 0.97 }, { "method": "VSEARCH", "scientificName": "Bowerbankia_imbricata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111667", "accession": "FJ152022.1.1825_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bowerbankia_imbricata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111667", "accession": "JN680939.1.1849_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Amathia_verticillata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:851581", "accession": "KM373518.1.1827_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bowerbankia_citrina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111664", "accession": "FJ152020.1.1770_U", "identity": 0.981, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Walkeria_uva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111676", "accession": "FJ152044.1.1859_U", "identity": 0.981, "query_cover": 0.9938 } ] }
organismQuantity	20.0

id	e105f3f9-1814-45b1-84d1-dddceb9af5cd
scientificName	Amathia verticillata
AphiaID	851581
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S74
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAGTAGCGTATATTTATATTGCTGCGTTTAAAAAGCTCGTAGTTGAAGCGTCAGACGCGGAGGCGCGGACGGCCGCACTGGTCGCTCTCGCTCCTCCGGGCCAGGCGCGGAGGGCGTCCGTCGCTTGCACTTCGCCGTGTGAGCGCGGCGCCGCCGCTCGTTCACCTTGAGGAAATTGAACCGCTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Amathia verticillata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:851581", "confidence": 0.99 }, { "method": "VSEARCH", "scientificName": "Amathia_verticillata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:851581", "accession": "KM373518.1.1827_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	19.0

id	369e4172-d89a-4274-b07f-937c410c3bae
scientificName	Amathia imbricata
AphiaID	851593
eventDate	2022-10-03
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S77
target_gene	18S
DNA_sequence	GCTGGTTTTAGAGTCGGCGAGCCAATGATTAATAGGGACTGCCGGGGGCATTCGTACTCGGACGGGAGAGGTGAAATTCAAGGATCGTCCGAAGACGCCCGACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTGCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Bowerbankia imbricata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111667", "confidence": 0.97 }, { "method": "VSEARCH", "scientificName": "Bowerbankia_imbricata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111667", "accession": "FJ152022.1.1825_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bowerbankia_imbricata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111667", "accession": "JN680939.1.1849_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Amathia_verticillata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:851581", "accession": "KM373518.1.1827_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bowerbankia_citrina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111664", "accession": "FJ152020.1.1770_U", "identity": 0.981, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Walkeria_uva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111676", "accession": "FJ152044.1.1859_U", "identity": 0.981, "query_cover": 0.9938 } ] }
organismQuantity	18.0

id	628c6a43-5daa-4626-8be3-ea4c6f96d970
scientificName	Amathia verticillata
AphiaID	851581
eventDate	2022-10-03
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S77
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAGTAGCGTATATTTATATTGCTGCGTTTAAAAAGCTCGTAGTTGAAGCGTCAGACGCGGAGGCGCGGACGGCCGCACTGGTCGCTCTCGCTCCTCCGGGCCAGGCGCGGAGGGCGTCCGTCGCTTGCACTTCGCCGTGTGAGCGCGGCGCCGCCGCTCGTTCACCTTGAGGAAATTGAACCGCTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Amathia verticillata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:851581", "confidence": 0.99 }, { "method": "VSEARCH", "scientificName": "Amathia_verticillata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:851581", "accession": "KM373518.1.1827_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	14.0

id	d34f1676-f4a1-448f-855b-29dcac08d0eb
scientificName	Amathia imbricata
AphiaID	851593
eventDate	2022-10-03
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S74
target_gene	18S
DNA_sequence	GCTGGTTTTAGAGTCGGCGAGCCAATGATTAAGAGGGACTGCCGGGGGCATTCGTACTCGGACGGGAGAGGTGAAATTCAAGGATCGTCCGAAGACGCCCGACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTGCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Bowerbankia imbricata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111667", "confidence": 0.83 }, { "method": "VSEARCH", "scientificName": "Bowerbankia_imbricata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111667", "accession": "FJ152022.1.1825_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bowerbankia_imbricata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111667", "accession": "JN680939.1.1849_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Amathia_verticillata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:851581", "accession": "KM373518.1.1827_U", "identity": 0.994, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bowerbankia_citrina", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111664", "accession": "FJ152020.1.1770_U", "identity": 0.988, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Walkeria_uva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111676", "accession": "FJ152044.1.1859_U", "identity": 0.988, "query_cover": 0.9938 } ] }
organismQuantity	4.0

Amathia verticillata in Fiji

Status

Amathia verticillata does not have an offial status in Fiji.

Notes

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