identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ostrea equestris",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:156924",
"confidence": 0.99
},
{
"method": "VSEARCH",
"scientificName": "Ostrea equestris",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:156924",
"accession": "KT317498",
"identity": 0.997,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Ostrea stentina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:489077",
"accession": "DQ226522",
"identity": 0.997,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Ostrea stentina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:489077",
"accession": "DQ226523",
"identity": 0.997,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Ostrea stentina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:489077",
"accession": "DQ640081",
"identity": 0.997,
"query_cover": 0.9967
},
{
"method": "VSEARCH",
"scientificName": "Ostrea stentina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:489077",
"accession": "DQ640082",
"identity": 0.997,
"query_cover": 0.9967
}
]
}
|